Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1199 ATGGAGAACGCGAATTCTGAGAATTCGGATCGTGAAATCTTCAAAGCTTGGTCGAAAGATGTTGCGGAATGTGAAGAAAACTTTAACGTGAGTGTGCAATCTGGATTGAGCAGTGAAGAAGTTGAGAATCGGCGACGGATCTATGGATTCAATGAATTGGAGAAGCATGATGGCCAATCGATTTGGAAATTGGTTCTGGAACAGTTTAACGACACGCTTGTTCGGATTTTACTCGCCGCTGCGATAATCTCGTTTGTGCTCGCGTGGTACGACGGAGATGAAGGCGGTGAGATGGAGATAACCGCTTTCGTGGAGCCGTTGGTGATTTTCTTGATTTTGATTGTCAACGCCATTGTTGGTGTGTGGCAAGAGAGCAATGCAGAGAAGGCGCTTGAAGCGTTGAAGGAGATTCAATCGGAGCACGCTACTGTTATTCGAGATAACGAGAAAATTTCGGATTTACCAGCAAAGGAATTGGTTCCTGGCGATATTGTTGAACTTAAGGTTGGTGATAAGGTTCCTGCAGATATGCGCGTTGTGCGGTTGATTAGTTCTACTTTGAGGTTAGAGCAGGGATCATTAACCGGAGAGAGTGAAGCTGTGAATAAAACTAACAAGCCTGTTCCTGAAGATACTGATATTCAAGGGAAGGGTTGTATTGTTTTCGCGGGGACTACGGTTGTTAATGGGAACTGCATTTGCTTGGTTACTCAGATTGGGATGGATACTGAGATTGGGAAGGTGCATAATCAGATACATGAGGCTTCGCAGAGCGAGGAGGATACACCATTGAAGAAGAAGCTGAATGAATTTGGAGAAACACTGACTATGATAATTGGATTGATATGCATATTGGTTTGGCTAATCAATGTTAAATACTTCCTGACCTGGGAAATTGTTGATGGCTGGCCGAGGAACTTTAAGTTCTCGTTCGAGAAGTGTACTTATTACTTTGAGATCGCTGTGGCTTTGGCTGTGGCTGCTATTCCGGAAGGTTTGCCTGCAGTGATCACAACTTGCTTGGCACTTGGTACGCGCAAGATGGCACAGAAGAATGCGCTGGTTCGGAAGCTGCCAAGCGTGGAAACTCTGGGTTGTACCACTGTGATTTGCTCGGATAAAACTGGTACATTGACTACAAACCAGATGTCAGTGACGAAATTGGTAGCTATTGGAACTAATGTAGATACACTGCGAGCCTTCAAGGTGGAAGGAACTACCTACAATCCTGCTGATGGTAGAATAGAGAACTGGCCGGCAGGTAACTTGGATGCAAATCTTGAGATGATAGCGAAAATTGCTGCAGTTTGTAATGATGCTGGAGTCACACAGTCGGAGCATAAGTTTGTTGCCCATGGAATGCCAACTGAAGCAGCATTGAAGGTTTTGGTAGAGAAGATGGGCCTTCCTGGAGGGTCCAAGGATGTACCATCAGCAAGTTTGCATAGTGTGCTACGTTGTAGTGAATGGTGGAATAAACATGACCCGCGGATTGCCACTCTTGAGTTTGACCGTGATAGGAAGTCAATGGGTGTTATTGTTGACTCTAGTCTGGGGAAAAAGTTGCTGCTGGTTAAGGGTGCTGTAGAAAACTTGTTAGAAAGAAGCTCTAAAATTCAGTTGTGTGATGGTTCTGCTGTGAAACTGGACAATAATGCTAAGAACCTCATATTGCAAGCTCTTCGTGAAATGTCAACAAGTGCATTACGCTGTTTGGGATTTGCATACAAGGATGAGCTCCCTGACTTCGAAAGCTACAGTGGTAATGATGACCATCCAGCTCACCAGCTTTTGCTTAATCCTTCCAACTATTCATCAATTGAAAGTGATCTTGTTTTTGTTGGTTTGGTTGGGTTGAGGGATCCTCCTAGGGAGGAGGTATACCAAGCAATTGAAGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATTACTGGAGACAATAAGAACACTGCAGAAGCTATATGCCATGAAATAGGTGTATTTGGACCCAATGAAGACACTAGTTTGAAAAGTTTAACTGGCAGAGAGTTTATGGAACTTCGTGATAAAAAAGCCCATCTGAGACAGAGTGGTGGACTTTTGTTTTCGAGGGCTGAACCTAGGCACAAGCAAGAAATTGTGAGGCTGCTCAAAGATGATGGAGAGGTGGTGGCCATGACTGGAGATGGTGTGAATGATGCACCTGCCTTAAAGCTTGCTGACATTGGTATTGCAATGGGCATTGCAGGGACAGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTGGCAGACGATAACTTTAGCTCAATAGTTGCAGCTGTTGGCGAGGGTAGATCTATCTACAATAATATGAAGGCTTTTATCAGGTACATGATCTCTTCCAACATTGGCGAGGTTGCTTCCATATTTCTAACAGCTGCACTCGGTATTCCTGAAGGGTTGATACCTGTCCAGCTTCTCTGGGTCAATCTTGTCACTGATGGACCCCCTGCAACAGCCTTAGGCTTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCCCGTCGCAGTGATGACTCTCTTATTAATTTGTGGATTCTATTCCGTTACCTGGTAATTGGGATCTATGTTGGATTAGCTACAGTTGGTGTCTTCATCATATGGTATACACATGCTTCTTTCTTGGGTATTGATCTTAGCAGGGATGGGCATTCACTTGTCACTTACTCCCAACTTGCCAACTGGGGTCAATGCTCAACATGGGATAACTTCACTGCTTCTCCCTTCACCGCTGGTTCCAAAGTTATCTCGTTCGATACACCCTGTGACTATTTCCAGGCTGGAAAGGTCAAAGCTATGACACTCTCCCTCTCGGTGTTGGTAGCCATTGAAATGTTCAACTCTCTCAATGCCCTTTCTGAGGATGGAAGCCTTCTAACAATGCCCCCATGGGTCAACCCTTGGCTTCTTCTGGCAATGTCGGTGTCATTTGGTCTGCACTTTTTGATCTTGTATGTGCCATTCTTAGCACAAGTATTTGGTATCGTGCCCCTGAGCTTCAACGAGTGGCTTTTGGTTCTGGCTGTTGCACTTCCTGTGATTCTAATAGACGAGATTCTGAAATTTGTTGGGAGGTGTACAAGTACAAGTGGATCTCAAGCAGCAGCTGCAAGATCAAAACAAAAATCAGAATAA 3159 0.446 MENANSENSDREIFKAWSKDVAECEENFNVSVQSGLSSEEVENRRRIYGFNELEKHDGQSIWKLVLEQFNDTLVRILLAAAIISFVLAWYDGDEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHATVIRDNEKISDLPAKELVPGDIVELKVGDKVPADMRVVRLISSTLRLEQGSLTGESEAVNKTNKPVPEDTDIQGKGCIVFAGTTVVNGNCICLVTQIGMDTEIGKVHNQIHEASQSEEDTPLKKKLNEFGETLTMIIGLICILVWLINVKYFLTWEIVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTKLVAIGTNVDTLRAFKVEGTTYNPADGRIENWPAGNLDANLEMIAKIAAVCNDAGVTQSEHKFVAHGMPTEAALKVLVEKMGLPGGSKDVPSASLHSVLRCSEWWNKHDPRIATLEFDRDRKSMGVIVDSSLGKKLLLVKGAVENLLERSSKIQLCDGSAVKLDNNAKNLILQALREMSTSALRCLGFAYKDELPDFESYSGNDDHPAHQLLLNPSNYSSIESDLVFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICHEIGVFGPNEDTSLKSLTGREFMELRDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKDDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINLWILFRYLVIGIYVGLATVGVFIIWYTHASFLGIDLSRDGHSLVTYSQLANWGQCSTWDNFTASPFTAGSKVISFDTPCDYFQAGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVLAVALPVILIDEILKFVGRCTSTSGSQAAAARSKQKSE* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1199 1052 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 1034 IPR023298 -
Lan5g1199 1052 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1049 - -
Lan5g1199 1052 Pfam Cation transporting ATPase, C-terminus 806 1031 IPR006068 -
Lan5g1199 1052 Gene3D - 35 255 - -
Lan5g1199 1052 Gene3D - 368 766 IPR023214 -
Lan5g1199 1052 SUPERFAMILY HAD-like 612 825 IPR036412 -
Lan5g1199 1052 SMART Cation_ATPase_N_a_2 15 89 IPR004014 -
Lan5g1199 1052 SFLD p-type atpase 352 773 IPR044492 -
Lan5g1199 1052 SUPERFAMILY Calcium ATPase, transduction domain A 139 251 IPR008250 -
Lan5g1199 1052 PRINTS P-type cation-transporting ATPase superfamily signature 190 204 - -
Lan5g1199 1052 PRINTS P-type cation-transporting ATPase superfamily signature 371 385 - -
Lan5g1199 1052 PRINTS P-type cation-transporting ATPase superfamily signature 615 626 - -
Lan5g1199 1052 PRINTS P-type cation-transporting ATPase superfamily signature 637 647 - -
Lan5g1199 1052 PRINTS P-type cation-transporting ATPase superfamily signature 721 740 - -
Lan5g1199 1052 PRINTS P-type cation-transporting ATPase superfamily signature 745 757 - -
Lan5g1199 1052 Pfam Cation transporter/ATPase, N-terminus 17 84 IPR004014 -
Lan5g1199 1052 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 695 802 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g1199 1052 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 310 393 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g1199 1052 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 108 298 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan5g1199 1052 Gene3D - 381 622 IPR023299 GO:0000166
Lan5g1199 1052 Pfam E1-E2 ATPase 137 351 - -
Lan5g1199 1052 SFLD Haloacid Dehalogenase 352 773 - -
Lan5g1199 1052 ProSitePatterns E1-E2 ATPases phosphorylation site. 373 379 IPR018303 -
Lan5g1199 1052 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1049 - -
Lan5g1199 1052 Pfam haloacid dehalogenase-like hydrolase 368 735 - -
Lan5g1199 1052 Gene3D - 67 1033 - -
Lan5g1199 1052 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 378 619 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1199 Lan-Chr5 25949159 25954899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1199 2 1052 Primary Pumps ATPases(2) AT1G07810 80.323 0.0 1731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1199 K01537 - gmx:100788807 1847.02