Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1198 ATGGCTGTCACCCATGAAAACAGACTCTCCTTCTTTAACCAATCCATGGAACTTGTCCAACCTCAATCCAGAACCCTTGGTGAACTCCTTAAACGCGTTGAAGATGCTCAAAACGACACCAACATTCTCCATTCTCACCATGTTCTTAACCTTCCACCTTCTCACTCTTTCATCTTATCATTCACCAACTTAACCTATTCTATCAAACTCCGACGTAAAATCACCTTCTCCCCAATCTTCTCACCAAACCATTCGCTTCAAAACGATGTCGTTGAACCCAAACACAACTGCACCACGAAAACCCTACTCAACGGTATCTCCGGCGAGGCCAAAGACGGCGAGATTATGGCGGTTCTCGGCGCTAGTGGCTCTGGGAAATCTACTCTTATTGACGCACTTGCTGATCGTATCTCTAAGGAGAGTCTCAAGGGAACGGTTACGTTAAACGGTGACGTTGTGGATTCGAGTTTGTTGAAGGTGATATCAGCTTATGTTATGCAAGATGATCTTCTTTTCCCTATGCTAACTGTTGAAGAAACTCTTATGTTCTCTGCGGAGTTTCGGTTACCTCGTTCTTTATCGAAATCGAAGAAAAAGGCGCGAGTTCAAGCCCTAATTGACCAACTCGGTCTCCGGAATGCGGCGACGACCGTTATCGGAGATGAAGGGCATCGCGGCGTTTCCGGCGGAGAACGCCGACGTGTATCAATCGGAATAGACATAATTCACGATCCGATAATTCTCTTCCTAGATGAACCTACCTCCGGACTAGACTCCACAAGCGCATTCATGGTGGTGAAGGTTCTTCAGCGAATCGCTCAGAGCGGAAGCATTGTGGTCATGTCAATTCATCAACCTAGTTACAGAATTCTAGGTCTATTAGACCGTTTGATTTTCCTCTCTCACGGCGAAACCGTTTTCAGCGGCTCTCCGGCGATAATCCCTGTGTTTTTCTCCGAGTTCGGTCACCCGATCCCAGAGAACGAAAACCGCACCGAGTTCGCATTAGATCTAATCCGCGAACTGGAAGAATCACCAAACGGCACAACAAACTTAGTAAATTTCAACAAAACATTCCAATTGAAAACCAAAACACCTTCATCAAAGTCACCAATTCCAAATCTATCCCTAAAAGACGCCATCAGTGCAAGCATATCCAGGGGTAAATTAGTCTCAGGAGCACCAACCACCACAACAACAACAACAACACTAACCTCAAACGAAACCACGCCGGTTGAAGCGTTCGCAAATCCATTCTGGTTAGAAATGCTAGTAATAGCAAAAAGATCGCTAACAAATTCGCGACGAATGCCAGAATTATTCGGAATTCGTATGGGTGCAGTTCTCGTGACAGGAGCAATATTAGCAACGATATTTTGGAAGCTTGATAATTCCCCAAAAGGTGTTCAAGAAAGGTTAGGGTTATTCGCGTTTGCAATGTCAACAACATTTTACACATGTGCTGAAGCAATACCAGTATTTCTACAAGAACGTTACATTTTCATGAGAGAAACTGCGTACAATGCTTATCGTCGTTCTTCTTACGTCTTGGCTCATTCTATTATCTCTTTGCCTGCGTTGGCGTTTCTTTCTTTTGCGTTTGCTGCAACTACTTTTTGGGCCGTGGGCCTTGCTGGTGGGCCTTCTGGCTTTTTCTTTTACTTCCTCACCATCTTTGCTTCTTTCTGGGCCGGAAGCTCATTTGTCACCTTTCTTTCAGGTGTTGTGTCTCACGTGATGCTGGGTTTCACTGTGGTAGTTGCAATTTTAGCATACTTTCTTCTCTTCAGCGGGTTCTTCATCAGTAGGAACAGGATCCCTCCATATTGGATATGGTTCCATTACTTATCCCTAGTGAAGTACCCTTATGAAGCTGTTTTACAAAACGAGTTTAATATTAACCCACCAACATGTTTCGTGAGAGGGATTCAGATATTTGATGGCACTCCATTGGGTTTAGTACCATTGGAGCTGAAGATGGAGTTGTTGAAGAGTTTGAGTAAGGTGTTGGGTATTAATATTACAAGCTCTACATGTGTCACTACAGGAGCAGATATATTGCAGCAACAAGGGATAACTCAACTCAACAAATGGAATTGCTTGTGGGTCACGGTTGCATGGGGCTTCTTCTTTAGATTTCTCTTTTATTTGGCATTACTCTTAGGGAGCAAGAACAAGAGAAGGTAG 2187 0.4408 MAVTHENRLSFFNQSMELVQPQSRTLGELLKRVEDAQNDTNILHSHHVLNLPPSHSFILSFTNLTYSIKLRRKITFSPIFSPNHSLQNDVVEPKHNCTTKTLLNGISGEAKDGEIMAVLGASGSGKSTLIDALADRISKESLKGTVTLNGDVVDSSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRNAATTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVVMSIHQPSYRILGLLDRLIFLSHGETVFSGSPAIIPVFFSEFGHPIPENENRTEFALDLIRELEESPNGTTNLVNFNKTFQLKTKTPSSKSPIPNLSLKDAISASISRGKLVSGAPTTTTTTTTLTSNETTPVEAFANPFWLEMLVIAKRSLTNSRRMPELFGIRMGAVLVTGAILATIFWKLDNSPKGVQERLGLFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPALAFLSFAFAATTFWAVGLAGGPSGFFFYFLTIFASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRNRIPPYWIWFHYLSLVKYPYEAVLQNEFNINPPTCFVRGIQIFDGTPLGLVPLELKMELLKSLSKVLGINITSSTCVTTGADILQQQGITQLNKWNCLWVTVAWGFFFRFLFYLALLLGSKNKRR* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1198 728 SMART AAA_5 112 327 IPR003593 -
Lan5g1198 728 Pfam ABC-2 type transporter 424 631 IPR013525 GO:0016020|GO:0140359
Lan5g1198 728 Pfam ABC transporter 103 255 IPR003439 GO:0005524
Lan5g1198 728 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 721 - -
Lan5g1198 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 312 IPR027417 -
Lan5g1198 728 ProSitePatterns ABC transporters family signature. 227 241 IPR017871 GO:0005524
Lan5g1198 728 Gene3D - 92 315 IPR027417 -
Lan5g1198 728 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 86 327 IPR003439 GO:0005524
Lan5g1198 728 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 15 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1198 Lan-Chr5 25942836 25945807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1198 102 287 Calmodulin-binding Proteins AT2G36910 29.101 1.15e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1198 K05681 - gmx:100803426 1073.15