Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1192 ATGGATACTAAAGAAGGAGAAAGGGTAGTTGTTGCAAAACCAGTTGCTTCAAGGCCTAATTGTTCTGCTTACAAATCTTTCTCAGAGCTACTTTCTGGTGCAATCAACGACTCGTCCCCTATTGAATCTTCTCGTACTACAGTTTCGGTTATTAGGCCAAAGACAGTGAGGTTAAAACCTGCAATGAATCACCCTCCTGCTGGTTTTCTTTCTTCTCAGGGCGACATTTTTGGAGCTGCACTTAGTGATTCTTCTGATAAGAGTCCTAAACCTGATAGCAAACAGTCCCTGATATATAGGCCAATAGCAAAACTTGTTTCAAAGACTACTGTTTCTCTTTTGGCAAATATAAAGGGAAATTGCAGTACTAGTCAGCAACAACCACGACAACTAATCGAGGCCAATCTTCAAAATCTCAACATTGAAAACGTTCGGACCAACAAGAGCACAAATGTTCATCAGAGCATTGCACCGCGTGCTGAAACAAATCTGACTAGTGAACCTTGTCGGATAGTAAAACAGAACTCGGAGGAGGACTTAAACTCTTTAGCGTCTGCAACGAATGGCGATCGACCTTCGTATGATGGATATAATTGGAGGAAATATGGGCAGAAGCAAGTAAAAGGAAGTGAATATCCAAGGAGTTATTATAAGTGCACATATCCTAATTGTCCAGTGAAAAAGAAGGTTGAAAGATCATTTGATGGACAGATTGCGGAAATTGTGTATAAAGGTGAACACAACCACTCGAAGACACAGCCTCCTAAGCACAACTCGGAAGGAACACAAGGATCAGGACTGGTTCCGGATATATGGAGTAATAATCACAATGAGAGGAATGAAGTTCAGAATGACACACTATATGTACATTCAGCTTTTCATGTCAAAGCTTCACAGCCTAATGTTTCTGCTCTATTCGGTGCAACTAATGCTGGCGGAGGAAGCAAAGAAAACTCTTGCGGTCTAAGTGCGGAATGTGAGGAAGGAAGGAAAGGTTTTGAGGCACAGGAAGAGGAACCAAGAAGCAAAAGAAGGAAAAATGAGAATCAGTCGAATGAAGCATCAATATCCGAGGAAGGTTTAGTAGAGCCGCGGGTTATGGTGCAAAGTTCTACAGATTCTGTAGTACTCGGCGATGGCTTTCGCTGGAGGAAATATGGACAGAAGGTGGTGAAGGGTAGTCCATATGCCAGAAGTTACTATAGATGCACTAATATCAACTGTAACGTTCGAAAACATGTAGAGAGAGCAATAGATGATCCAAGATCATTTGTTACTACATATGAGGGAAAGCATAATCATGAAATGCCACTCAAGAACTCAGCAAGTGTTGCATATGATAAAGATTCACAGGTTTCTCTTAGCAAAAACAAGCCATGA 1380 0.4138 MDTKEGERVVVAKPVASRPNCSAYKSFSELLSGAINDSSPIESSRTTVSVIRPKTVRLKPAMNHPPAGFLSSQGDIFGAALSDSSDKSPKPDSKQSLIYRPIAKLVSKTTVSLLANIKGNCSTSQQQPRQLIEANLQNLNIENVRTNKSTNVHQSIAPRAETNLTSEPCRIVKQNSEEDLNSLASATNGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSFDGQIAEIVYKGEHNHSKTQPPKHNSEGTQGSGLVPDIWSNNHNERNEVQNDTLYVHSAFHVKASQPNVSALFGATNAGGGSKENSCGLSAECEEGRKGFEAQEEEPRSKRRKNENQSNEASISEEGLVEPRVMVQSSTDSVVLGDGFRWRKYGQKVVKGSPYARSYYRCTNINCNVRKHVERAIDDPRSFVTTYEGKHNHEMPLKNSASVAYDKDSQVSLSKNKP* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1192 459 MobiDBLite consensus disorder prediction 246 275 - -
Lan5g1192 459 MobiDBLite consensus disorder prediction 444 459 - -
Lan5g1192 459 Gene3D WRKY domain 362 438 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 Gene3D WRKY domain 179 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 Pfam WRKY DNA -binding domain 379 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 Pfam WRKY DNA -binding domain 195 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 440 IPR044810 GO:0003700
Lan5g1192 459 MobiDBLite consensus disorder prediction 436 459 - -
Lan5g1192 459 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 440 - -
Lan5g1192 459 MobiDBLite consensus disorder prediction 331 364 - -
Lan5g1192 459 SUPERFAMILY WRKY DNA-binding domain 371 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 MobiDBLite consensus disorder prediction 331 352 - -
Lan5g1192 459 SUPERFAMILY WRKY DNA-binding domain 192 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 MobiDBLite consensus disorder prediction 255 275 - -
Lan5g1192 459 ProSiteProfiles WRKY domain profile. 372 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 SMART WRKY_cls 377 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan5g1192 459 ProSiteProfiles WRKY domain profile. 195 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1192 Lan-Chr5 25912496 25916132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1192 92 438 WRKY Transcription Factor Family AT2G37260 44.986 1.14e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan5g1192 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1192 - - lang:109348399 920.228