Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1187 ATGTTAACAAATTTGTATGGTGTTCTATGTGCCAGAGGTATTGAGGCTAAGCAGCCCAACTCTGCTATTCGTAAATGTGCCAGGGTTCAACTCATTAAAAATGGAAAGAAGATTGCTGCGTTTGTGCCAAATGATGGTTGCTTAAACTATATCGAAGAAAATGATGAAGTCTTGATTGCTGGATTTGGACGTAAGGGTCATGCCGTTGGTGATATTCCTGGAGTCAGATTCAAGGTTGTGAAAGTTTCTGGTGTATCTCTCCTGGCTCTTTTCAAGGAGAAGAAAGAGAAGCCAAGGTCTTAA 303 0.4092 MLTNLYGVLCARGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1187 100 PANTHER BNACNNG03140D PROTEIN 8 100 - -
Lan5g1187 100 PIRSF RPS12p_RPS12a_RPS23e_RPS12o 7 100 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lan5g1187 100 Pfam Ribosomal protein S12/S23 9 99 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lan5g1187 100 SUPERFAMILY Nucleic acid-binding proteins 12 98 IPR012340 -
Lan5g1187 100 Gene3D - 5 100 IPR012340 -
Lan5g1187 100 ProSitePatterns Ribosomal protein S12 signature. 17 24 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lan5g1187 100 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 8 100 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1187 Lan-Chr5 25883519 25884394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1187 8 100 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 96.774 5.17e-60 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1187 K02973 - oeu:111404096 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1187 5 25883519 25884394 Lan5g1187 5 25883519 25884394 ECH
Lan5g1187 5 25883519 25884394 Lan19g0453 19 6245243 6248096 LSH