Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1184 ATGGTGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTAAGCCCTGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAGGAAGAGATGGTTTGGGAAGCAAAAATTGGAGACTTTAGGATCATTCTCGGGAACTGATAATGCATTGTCGCTTCCTCCACCTGAAGAGATTAAATTGACTAATCATGAAAATGAAAACATTCATGATAATGTTGTTGAAGTTGCAACAACCATGGTTGCTGAGGAACCTGTTCCAGTTCCAGTTCCTGTTGTTCAAACAGTTGCTAGAGTGGAACCATTGACTGAAAAAACAGTTGCTAATGTTGAAGGTGTTAAAATTGCTTGGTTTGCCGGTAAACCAAAGGATGAGGTGGCAGCACTCAAGATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCGTTGCGGGCTTTAAGAGGGCTGGTGAGGTTGAAATCATTGATGGAAGGGGCCATTGTAAAACGCCAAGCCACAAGTACCCTCCGCTCTATGCAGACATTAGCACGCATGCAATCTCAGATTCATTTTAGGAGGATCAGAATGTTAGAGGAGAATCAAGCTCTGCAGAGACAGCTCTTACAGAAGCATGCAAAAGAGCTTGAGAGTATTCGGATTGGAGAAGAATGGGATGACAGCCTACAATCAAAAGAACAAATTGAAGCCAAGTTACTAAGCAAATACGATGCTGCTATGAGAAGAGAAAGAGCACTGGCTTATTCATTCACTCATCAGAAAAATGGGAAGACTACATGTAGATCTATAAATCCAATGTTCATGGATCCAACCAATCCTAGCTGGGGTTGGAGCTGGTTGGAACGATGGACAGCAGCCCGGACTTGGGAGGACCGTAGCCAGATGGATAAAGACCTGAATCACCGCTCGTCTATTAGAAGCTCAATCCGCAGCATCACCGGTGCGGAGATCAGCAAATCATTTGCGCGTTTCCAGCTCAATTCTGAAAAGCATTCTCCAACAGCCTGCCAAAAGCCTGTCTCGCCTAACTTTCAGTCCCATCCAACTCCTTCCAAACCACCTTCTCCATCAGTTGCTATGAAACTGAAGAAGGCGAGCCCAAAAGGAAGTTCGGTCGTGGATGACGACTCCAAAAGCATGGTCAGTGTACAGTCAGGCCAGTTCCGGAGGCACTCCATTGCTAGTTCGTCAGTGAGAGATGATGATAGCCTTGCTAGCTTTCCGTCCGTTCCAAGTTACATGGTGCCAACTCAATCTGTAAGAGCTAAGTCCAGGACACAAAGTCCATTAGCCACCGAAAAAGGGTCCTTTAGGACTGCAAAGAAACGTCTTTCTTACCCGGCTTCACCTGCCAGACCAAGGAGACATTCAGGTCTACCAAATGTAGAAAGAAGCTTAAATGAAGAATTCACTGTGGCCAATTGA 1431 0.4493 MVRKGNWFSSVKKALSPDSKEKKDQKSSKSRKRWFGKQKLETLGSFSGTDNALSLPPPEEIKLTNHENENIHDNVVEVATTMVAEEPVPVPVPVVQTVARVEPLTEKTVANVEGVKIAWFAGKPKDEVAALKIQTAFRGYLARRALRALRGLVRLKSLMEGAIVKRQATSTLRSMQTLARMQSQIHFRRIRMLEENQALQRQLLQKHAKELESIRIGEEWDDSLQSKEQIEAKLLSKYDAAMRRERALAYSFTHQKNGKTTCRSINPMFMDPTNPSWGWSWLERWTAARTWEDRSQMDKDLNHRSSIRSSIRSITGAEISKSFARFQLNSEKHSPTACQKPVSPNFQSHPTPSKPPSPSVAMKLKKASPKGSSVVDDDSKSMVSVQSGQFRRHSIASSSVRDDDSLASFPSVPSYMVPTQSVRAKSRTQSPLATEKGSFRTAKKRLSYPASPARPRRHSGLPNVERSLNEEFTVAN* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1184 476 SMART iq_5 125 147 IPR000048 GO:0005515
Lan5g1184 476 MobiDBLite consensus disorder prediction 1 36 - -
Lan5g1184 476 PANTHER IQ-DOMAIN 5-RELATED 1 473 - -
Lan5g1184 476 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Lan5g1184 476 MobiDBLite consensus disorder prediction 417 436 - -
Lan5g1184 476 MobiDBLite consensus disorder prediction 330 347 - -
Lan5g1184 476 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 473 - -
Lan5g1184 476 MobiDBLite consensus disorder prediction 374 388 - -
Lan5g1184 476 MobiDBLite consensus disorder prediction 417 476 - -
Lan5g1184 476 MobiDBLite consensus disorder prediction 330 388 - -
Lan5g1184 476 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1184 Lan-Chr5 25871772 25875625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1184 1 465 IQD Protein Family AT5G03040 47.094 4.99e-128 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1184 - - gmx:100800080 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1184 5 25871772 25875625 Lan5g1184 5 25871772 25875625 ECH