Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1173 ATGGTGAAGGAAACAGAGTATTACGATATTCTTGGTGTAATTCCTTCTGCTTCTGATGACCAAATTCGCAAGGCTTATTATCACAAGGCAATGCAAGTTCATCCTGATAAAAATCTAAACGATCCTAGTGCTGCTGAAAAGTTCCAGATTCTCGGAGAAGCATACCAAGTGTTGAGTGATCCGGTGCAAAGGAATGTGTATAATCAAAATGGGAAGCATTCTGTATCTAGAGAAACTATGCTTGACCCCACTACTGTATTTGCTCTGCTCTTTGGAAGTGAATTGTTTGAAGACTACATAGGGCATGTAGCTGTGGCATCAATGGTTTCTTCTGAGCTAGCTGATGAAAATGAGGACCCTGATAACCTGCTGGAAAAGTTAAAGACTGTCCAGAAAGAAAGGGAAGAAAAACTAGCAAGATTTTTAAAAGATTTTCTTGGCCAGTATGTCCATGGTGATAAAAAGGGATTCATCCACCGCGCAGAATCTGAGGCAAGGAGGCTTTCTGATGCTGCCTTTGGAGTTGACATGTTACACACCATCGGTTATGTATATTCAAGACAAGCAGCACAAGAACTAGGGAAAAAAGCCATTTACCTTGGAGTCCCATTTCTTGCTGAATGGGTTCGCAATAAAGGACATTCCTGGAAATCACAGATCACAGCTGCAAAAGGTGCTTTTGAGTTGCTTCAGCTTCAAGAAGACATCCGCAAGCAATTTAAAATGCATGGCAGTGGCCTAGAAAATGACATAGAATCCCATATCCGCCATAATAAGGATACATTGACGAATTCTTTGTGGAAGTTAAATGTAGTGGACATAGAAGTAACCCTTGTACATGTGTGCCAAATGGTGCTAAGAGAAAATAACGTTAAGAAGGACGAACTTAAAGTTCGGGCTCATGCTCTAAAAGTTCTTGGGAAGATATTCCAGGACAACAATTCAAAAGGAAGAGAAACTTTGAAAAAGAAAATCAATGCTGCTTACGATGATGAAGGAAACAGTTGTGATTCTTCAGAGGATGAATCACCAAGAACACTTTCCTATCGAACTCCCTTTTTCACTCAGGCTATTGGTACGCTTTTCAAATGCCTCTGTAATCCTGCTTTTGATGTAGATGATGAAGAGATAGTTTACAAAAATAAACGATCTATATAA 1158 0.3972 MVKETEYYDILGVIPSASDDQIRKAYYHKAMQVHPDKNLNDPSAAEKFQILGEAYQVLSDPVQRNVYNQNGKHSVSRETMLDPTTVFALLFGSELFEDYIGHVAVASMVSSELADENEDPDNLLEKLKTVQKEREEKLARFLKDFLGQYVHGDKKGFIHRAESEARRLSDAAFGVDMLHTIGYVYSRQAAQELGKKAIYLGVPFLAEWVRNKGHSWKSQITAAKGAFELLQLQEDIRKQFKMHGSGLENDIESHIRHNKDTLTNSLWKLNVVDIEVTLVHVCQMVLRENNVKKDELKVRAHALKVLGKIFQDNNSKGRETLKKKINAAYDDEGNSCDSSEDESPRTLSYRTPFFTQAIGTLFKCLCNPAFDVDDEEIVYKNKRSI* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1173 385 PRINTS DnaJ domain signature 8 26 IPR001623 -
Lan5g1173 385 PRINTS DnaJ domain signature 26 41 IPR001623 -
Lan5g1173 385 PRINTS DnaJ domain signature 43 63 IPR001623 -
Lan5g1173 385 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Lan5g1173 385 Gene3D DnaJ domain 1 86 IPR036869 -
Lan5g1173 385 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Lan5g1173 385 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Lan5g1173 385 CDD DnaJ 6 60 IPR001623 -
Lan5g1173 385 Pfam DnaJ domain 6 68 IPR001623 -
Lan5g1173 385 SMART dnaj_3 5 63 IPR001623 -
Lan5g1173 385 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Lan5g1173 385 SUPERFAMILY Chaperone J-domain 2 102 IPR036869 -
Lan5g1173 385 Pfam X-domain of DnaJ-containing 131 320 IPR026894 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1173 Lan-Chr5 25701479 25711076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1173 7 68 C2H2 Transcription Factor Family AT1G74250 41.791 3.42e-09 56.6