Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1161 ATGGAAATAAATTATGGAATATTAAGGAACAATAATGCTACTACCTCGTTTGTTTCTCTTGTTTTATTATTATTGTTACATGTTTTTGTTTTGTTAAGTATTGTACCATGGGTTCAATGTGCTGATAAGGGTGATTCTTCAGTGTCTTCATTTTACTCTGAAGAAATATATAAGGAGCTTGAAGGTCTCACTGTAACATTAACAAGGGATATCAAGGCAGAATTAGGCTTCTGCATAAAGGATGCGAAGCAAGATTGGGAGGAAGCCTTTAATTTTAGGGGAAAGTTGGAATTTGTGGATAATTGTGTTAAGCAAAAAGGAGATTTCAGAGATAGAATATGTACTTCGGCTGAAATAAGGTACTACTTCCGAAGTTTGTTCGAACAAGGGGCCTCGACATCAAGTTATGTAAAACCAAACAAGAATTGCAATTTGACTTCATGGGTTTCTGGTTGTGAACCTGGTTGGAGTTGTAGTGTTAGCCAGAATGTTGATCTCAAAAAGGATACAAAGGAAATTCCTATTAGAATTAAGGACTGTCAACCTTGCTGTGATGGATTTTTCTGCCCTCAAGGGTTAACTTGCATGATAACTTGCCCACTTGGCTCTTATTGTCCACTTGCAAAACTGAACAAAACAACCGGAGTATGCGATCCATATAATTACCAGATACCTCCAGGAGAAACAAATCATACTTGTGGTAGTGCTGATGTTTGGTCTGGTATTATGAACAGCAGTGATATCTTCTGTTCTCCGGGATCATACTGCCCGACCGCCATACGAAAAGTTCCTTGTAGTAGTGGATATTACTGCAGGACGGGCTCAACTCATCCGAATCCATGCTCCAGGTTGAGTACCTGTAATCCAAACACATCAACTCAAAATATGCATGCTTATGGTGCTCTCTTTATTATTGCTTTGAGTACTCTCCTGATCTTCATTTATAACTGTTCTGATCAAGTTCTAGCTACTAGAGAAAGAAGGCAAGCTAAATCCAGAGAAGCTGCAGCGAGACATGCAAGAGAAACTGCGCAAGCTCGTGAAAGGTGGAAAATAGCAAAAGGTGTTGCTAAGAAGAAAACATTGGATTCATTATCACGAACCTTTTCACGTAGAAAATCAACTAAGCAAGGAGAACCGACAAAGGGTTTTGGTCTAACGCCTCCGGATGCTGCAAGCTCATCCGAGCCTTCGGGTTCAAAAGGCAACAAAAAAGAACCTAGCAACCTTAGTAAAATGATGAACTCACTCGAGAATGATCCAAATAGCCAAGAAGGATTCGATCTTCAGATTGGAGATAAGAATGTTAAAAAGAATATGCCGAAGGGAAAACAGTTACATACACATAGCCAAATCCTAAGGTATGCTTATGGTCAGATTGAAAAGGAAAAAGCTCAGCAAGAGAACAATAAGAACTTGACATTCTCAGGAGTGATTTCGATGGCTACTGAAGGCGAGGTTAGGACAAGGCCTGTGATTGAGATAGCTTGCAAAGATCTAACTCTGACTTTGAAAGGGAAAAACAAATGTATACTGAGGTGTGTGAATGGTAAAATCATGCCGGGTAGAGTTTCGGCTGTGATGGGACCCTCAGGGGCTGGAAAGACAACATTTCTTTCAGCTATTGCAGGAAAAGCAAGAGGGTGTACTATGACAGGACAAATTCTAGTTAATGGAAAACAAGAATCCATTCACTCATATAAGAAGATTACTGGTTTTGTGCCTCAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTAAGGTTCAGTGCAAGATGCAGACTACCAGATGACATGCCGAAACCAGACAAGGTTCTAATAGTTGAAAGAGTGATTGAGTCTTTGGGTCTTCAGAACATAAGGGACTCTCTAGTTGGAACAGTAGAGAAGAGAGGTATATCTGGAGGGCAAAGAAAAAGAGTAAATGTAGGACTTGAAATGGTGATGGAACCTTCCTTATTAATCTTAGATGAGCCTACAACTGGTTTGGATAGTGCATCTTCTAGTTTACTGCTTAAAGCACTTAGACGCGAAGCTCTCGAAGGGGTTAATATTTGCATGGTACTTCATCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAGTATTCCTAGCGAAAGGTGGCCTTACTGCATATCATGGTCCAGTTAAAAAGGTAGAAGAATATTTTGCAGGCATTGGAATCCCCGTACCGGATCGTGTGAATCCACCGGACCATTTTATTGACATTCTTGAAGGTTTAGTGAAACCAAGTTCAGGTGTAACTCATGAACAACTTCCTGTCAGATGGATGCTTCATAATGGATATCCAGTACCACATGACATGCTTCATTTTGCGGATCAAATTGCCGCGTCTTCATCTGGTTCACAAGTACCTGAAGCAACAAAGGCTAATGATGAACCTGTTGATCAATCCTTTGCTAAAGAATTTTGGGCTGATATGAAGAGTAATGTTCAGATCCAAAGAGATCACATAGAAGCAATCTTCTTAAGAACAAAGGACTTATCTAACCGAATAACTCCCGGTGTTAGCAGACAATATAGATACTTCGTTGGACGGATTGGCAAGCAGCAACTGAGAGAAGCAAAACTAATAGCAGTGGACTATCTTCTTTTATTAGTTGCTGGTGCTATCTTAGGAACTCTTACCAAAGTGAATGATGAAACATTTGGGTCCCTTGGCTATACATATACTATCATTGCTGTTTCCCTACTTTGCAAGATTGCGGCTCTGAGATCATTTTCTTTGGATAAATTACATTACTGGAGAGAAAGTGCGGCCGGAATAAGCAGTCTGGCTCATTTTCTAGCCAAAGATACAATTGATCTTTTCAATACAATTGTCAAACCTTTGGTTTATCTGTCCATGTTCTACTTTTTTAGCAATCCGAGATCAAGCTTCGGCAGTAACTACGCAGTTTTGCTTTGTCTAGTGTACTGTGTGACTGGCATGGCTTATGCATTAGCCATTTATTTTGAGCCTGGTCCTGCACAACTGTGGTCAGTGCTTGTTCCTGTTGTTATGACTCTCATTGCAAGTCAGAATAGAGATACTCCATTTATGAAGATCCTAGTAAAATTGTGCTATCCAAAATGGGCTTTGGAGGCATTTATCATTGCAAATGCTGAAAGGTACACTGGTGTATGGCTCATAACTCGTTGTGGTTCATTGATGAGTACCGGTTATGATGTTAGTGATTGGCCTATTTGTCTCATTATCCTGATTTTATATGGTATACTTGCTCGAATTGTCGCATTCTTTTGTCTAGTCATATCTCAAAAGAAATAA 3303 0.3972 MEINYGILRNNNATTSFVSLVLLLLLHVFVLLSIVPWVQCADKGDSSVSSFYSEEIYKELEGLTVTLTRDIKAELGFCIKDAKQDWEEAFNFRGKLEFVDNCVKQKGDFRDRICTSAEIRYYFRSLFEQGASTSSYVKPNKNCNLTSWVSGCEPGWSCSVSQNVDLKKDTKEIPIRIKDCQPCCDGFFCPQGLTCMITCPLGSYCPLAKLNKTTGVCDPYNYQIPPGETNHTCGSADVWSGIMNSSDIFCSPGSYCPTAIRKVPCSSGYYCRTGSTHPNPCSRLSTCNPNTSTQNMHAYGALFIIALSTLLIFIYNCSDQVLATRERRQAKSREAAARHARETAQARERWKIAKGVAKKKTLDSLSRTFSRRKSTKQGEPTKGFGLTPPDAASSSEPSGSKGNKKEPSNLSKMMNSLENDPNSQEGFDLQIGDKNVKKNMPKGKQLHTHSQILRYAYGQIEKEKAQQENNKNLTFSGVISMATEGEVRTRPVIEIACKDLTLTLKGKNKCILRCVNGKIMPGRVSAVMGPSGAGKTTFLSAIAGKARGCTMTGQILVNGKQESIHSYKKITGFVPQDDIVHGNLTVEENLRFSARCRLPDDMPKPDKVLIVERVIESLGLQNIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLVKPSSGVTHEQLPVRWMLHNGYPVPHDMLHFADQIAASSSGSQVPEATKANDEPVDQSFAKEFWADMKSNVQIQRDHIEAIFLRTKDLSNRITPGVSRQYRYFVGRIGKQQLREAKLIAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTIIAVSLLCKIAALRSFSLDKLHYWRESAAGISSLAHFLAKDTIDLFNTIVKPLVYLSMFYFFSNPRSSFGSNYAVLLCLVYCVTGMAYALAIYFEPGPAQLWSVLVPVVMTLIASQNRDTPFMKILVKLCYPKWALEAFIIANAERYTGVWLITRCGSLMSTGYDVSDWPICLIILILYGILARIVAFFCLVISQKK* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1161 1100 Pfam ABC transporter 514 663 IPR003439 GO:0005524
Lan5g1161 1100 CDD ABCG_EPDR 493 719 - -
Lan5g1161 1100 ProSitePatterns ABC transporters family signature. 636 650 IPR017871 GO:0005524
Lan5g1161 1100 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 45 1096 - -
Lan5g1161 1100 MobiDBLite consensus disorder prediction 363 378 - -
Lan5g1161 1100 Pfam ABC-2 type transporter 693 1100 IPR043926 GO:0140359
Lan5g1161 1100 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 45 1096 - -
Lan5g1161 1100 Gene3D - 485 730 IPR027417 -
Lan5g1161 1100 MobiDBLite consensus disorder prediction 391 426 - -
Lan5g1161 1100 MobiDBLite consensus disorder prediction 363 426 - -
Lan5g1161 1100 SMART AAA_5 521 713 IPR003593 -
Lan5g1161 1100 MobiDBLite consensus disorder prediction 333 352 - -
Lan5g1161 1100 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 495 736 IPR003439 GO:0005524
Lan5g1161 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 495 718 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1161 Lan-Chr5 24890901 24898528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1161 522 715 Calmodulin-binding Proteins AT2G36910 28.713 2.71e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1161 - - gmx:100812387 1748.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1161 5 24890901 24898528 Lan5g1161 5 24890901 24898528 ECH
Lan5g1161 5 24890901 24898528 Lan7g0055 7 267592 272497 ECH