Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1156 ATGGAGTTTCAAAAGAAGAAGATCCTCAAGTCTTTGATTACAAAGGTACTAAAATCTCTTCAATTCTTATCACACAATGAAGCTTATTCAAGAAGGGTTTATACAATAAGTGACATTGATGATGAAAATGAAGCTACAACAAGGGTTCCAAAAGATGTTAAAGAAGGACATTTTGCAGTTATAGCAATCAAGGGTGAAGAAGCAAAAAGGTTCATTGTTGAGTTAGATTACTTAACTGATCCTGATTTCTTGAAACTTTTGGAGAAATCTAAGGAAGAATTTGGATTTGAACAAAAGGGTGTGATTATTATTCCTTGCAAGCCTCAAGAACTTCAGAAGATTATAGAGAATCGAAAAGTTGATAATGCAACTATGTAA 378 0.3254 MEFQKKKILKSLITKVLKSLQFLSHNEAYSRRVYTISDIDDENEATTRVPKDVKEGHFAVIAIKGEEAKRFIVELDYLTDPDFLKLLEKSKEEFGFEQKGVIIIPCKPQELQKIIENRKVDNATM* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1156 125 Pfam Auxin responsive protein 24 115 IPR003676 GO:0009733
Lan5g1156 125 PANTHER F8A24.8 PROTEIN 8 120 - -
Lan5g1156 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1156 Lan-Chr5 24850610 24851143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1156 28 106 Calmodulin-binding Proteins AT5G20810 40.741 7.41e-14 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1156 5 24850610 24851143 Lan5g1156 5 24850610 24851143 ECH
Lan9g0419 9 6055535 6056021 Lan5g1156 5 24850610 24851143 LSH