Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1153 ATGCAAATGTCACAAGAAGAAGATTCTTGTTCCAACACTATTGAGCAATGGAAATGGTCTGAAATGCAAGGCCTTGAGCTTCACCCACATTCTCAATCTTCAAAACCAAGCCAAGAACAAATGGGTACTTCTCTTTCTCAACAACCCAACAAAGATATTGATGGTGTTGTTGATGATGCTATTTCTAATGGTGTTAATGGTAATGGTAATGGTAACAACACTAGTGGGGAAAAGAAGAAAACAAAAGCTGAGAGTGTTCCTCCTATAGGGTTTGTTAAGCTTTTCAGATTTGCTGATGGGTTGGATTATATTCTCATGGCAATTGGAACTGTTGGAGCTATTGTACATGGTTGTTCTTTGCCTATTTTCCTTCGGTTCTTTGCTGATCTTGTTAATTCATTTGGTTCCAATGCTAATGATGTTGACAAAATGACCCAAGAAGTTGTCAAGTATGCATTTTATTTCCTTGTGGTAGGTGCTGCTATATGGGCATCTTCATGGGCAGAGATTTCGTGTTGGATGTGGACCGGAGAGCGGCAATCAACTAAGATGAGGATCAAGTACTTGGAAGCTGCTTTGAATCAGGACATTCAGTTCTTTGACACTGAGGTTCGAACATCCGATGTTGTTTTCGCCATCAATACAGATGCTGTCCTGGTCCAAGATGCTATTAGTGAGAAGCTGGGTAATTTCATTCACTACATGGCCACATTTGTTTCTGGTTTTGTTGTCGGTTTCACTGCAGTATGGCAATTGGCTCTCGTAACCCTTGCTGTAGTCCCTATGATAGCTGTGATTGGTGCCATTCACACAATCACCTTGGCTAAGCTCTCTGGAAAAAGCCAGGAATCTCTTTCTCAAGCTGGCAACATCGCAGAACAGACGGTTGCACAAATTCGAGTAGTGCTGGCCTTTGTTGGTGAGTCGAGAGCATTGAAGGCCTACTCATCTGCCTTGAAGGTTGGTCAGAAGCTTGGTTACAAAACTGGCTTTGCAAAGGGGATAGGATTGGGTGCCACTTACTTCGTTGTTTTCTGCTGTTATGCACTTCTGCTATGGTATGGAGGCTATCTGGTTAGGCACCACTACACCAATGGAGGACTTGCAATTGCAACCATGTTTGCTGTTATGATTGGTGGATTAGGTTTAGGCCAGTCTGCACCGAGCATGGCTGCATTTACTAAGGCCAGAGTTGCTGCTGCAAAAATTTTCCGTATAATTGATCACAAACCGAGTATAGACCGAAACAGTGAATCTGGTTTGGAGCTAGAATCTGTGACAGGACTTGTGGAGCTAAAAAGTGTAAACTTTTCATACCCAGCGAGACAAGATGTTCAGGTCCTCAATGATTTCTCCTTGAACGTGCCTGCTGGCAAGACTATTGCTTTGGTGGGTAGCAGTGGTTCCGGCAAGAGCACTGTTGTTTCCCTCATTGAAAGATTCTATGACCCATCTTCAGGACAAGTTCTGTTAGATGGGCATGACATAAAAACATTGAAACTTAGATGGCTGAGGCAGCAAATAGGACTAGTAAGCCAAGAACCGGCTCTATTTGCTACCACAATTCGAGAAAATATACTATTGGGCAGGCCTGACGCAGACCAGGGTGAGATTGAAGAAGCTGCCAGGGTTGCTAATGCTCATTCGTTCATCAACAAACTTCCTGAAGGCTATGAAACCCAGGTAGGAGAGAGAGGTTTGCAACTTTCAGGAGGACAAAAGCAAAGAATAGCAATAGCAAGGGCAATGCTGAAAAACCCAGCAATTCTTCTGCTAGATGAGGCAACAAGTGCACTGGACTCTGAGTCAGAAAAGCTGGTGCAAGAAGCCCTTGACCGGTTCATGATCGGTAGAACAACTCTTGTAATTGCTCATCGCCTATCCACTATTCGCAAAGCGGACCTCGTAGCTGTACTTCAGCAAGGACGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTTTCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAAGATGCAGGAGATTGCGCATGAAACTGCTATGAGTAATGCCAGAAAGAGTAGTGCAAGACCTTCAAGTGCAAGAAATTCTGTAAGCTCACCCATAATTACTCGAAATTCTTCTTATGGCCGGTCACCATACTCACACAGGCTGTCTGATTTCTCGACTTCTGATTTTAGTCTGTCCCTTGACGCATCACATCCGAATTACAGGCATGAAAGACTTCCCTTCAAAGAGCAAGCGAGCTCTTTCTGGCGACTTGCGAAAATGAACTCTCCTGAATGGCTTTATGCTTTAATTGGCTCTATAGGCTCTGTTGTTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTATTACAATCCAGACCATAGATTCATGATCCGACAGATAGAAAAGTACTGCTACTTGTTGATTGGGCTTTCATCGGCTGCGCTTCTCTTCAACACATTGCAACACTTCTTTTGGGATATTGTTGGAGAAAATCTTACAAAACGAGTGAGGGAGAAGATGCTGACTGCTGTGCTAAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGGCCGGATAGCTGCAAGGCTCTCTCTCGATGCCAACAATGTCAGATCAGCCATTGGAGATAGAATTTCAGTGATTGTGCAGAACACTGCACTTATGTTAGTTGCCTGCACTGCAGGGTTTGTGTTGCAATGGCGCCTTGCCCTTGTCCTCGTAGCTGTCTTCCCTGTGGTTGTTGCTGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACATGGAAGCTGCTCATGCCAAGGCCACACAACTAGCAGGAGAGGCTATAGCCAATGTGAGAACTGTTGCAGCTTTCAATTCAGAAACAAAAATTGTTCGCCTTTTCACATCCAACCTTGAAACTCCACTAAAACGGTGCTTCAGGAAGGGACAAATAGCTGGAAGTGGATATGGTATTGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAACACGGCATCTCTGATTTCTCTAAAACAATTCGGGTTTTTATGGTCCTCATGGTCTCTGCTAATGGTGCTGCCGAAACTTTAACCCTAGCTCCTGACTTCATCAAGGGAGGTCGAGCCATGAGGTCAGTCTTTGAGTTCCTTGACCGTAGAACTGAAATTGAGCCAGATGATCCTGATGCTACTCCTGTTCCTGATCGCCTTCGTGGTGAAGTTGAACTTAAGCATGTAGACTTCTCTTATCCTACCCGGCCAGATATGCCAGTTTTCCACGACCTTAGTCTCCGTGCGAGGGCAGGTAAAACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGTAAGAGTTCAATCATTGCACTTATACAAAGATTCTATGATCCAACATCTGGAAGGGTCTTGATTGATGGGAAGGACATTAGGAGATACAATCTTAAGTCCCTGAGAAGGCACATTTCTGTAGTGCCTCAAGAGCCTTGCTTGTTTGCAACTACTATTTACGAAAACATTGCTTATGGTCATGATTCGGCTACTGAAGCTGAGATAATTGAGGCTGCAACTCTTGCCAATGCACACAAGTTCATATCTTCCCTCCCAGATGGATACAAAACATTTGTCGGGGAGAGAGGAGTTCAACTATCCGGAGGACAAAAGCAACGAATAGCAGTTGCTCGTGCATTTGTGAGGAAGGCCGAGCTTATGCTTCTCGATGAGGCAACAAGTGCACTTGATGCTGAATCCGAGAGGTCTGTTCAGGAGGCACTAGACCGTGCCTCATCGGGTAAAACAACCATCATTGTTGCACACAGGTTATCGACTATCAGGAATGCCAATGTGATTGCTGTGATTGATGATGGGAAAGTAGCTGAGCAAGGTTCACATTCACATTTGTTGAAAAACTACCCGGATGGGACTTATGCGCGAATGATTCAGCTACAAAGGTTCACAAACACCCAAGTCATTGGCATGGCTTCAGGTTCAAGTTCTTCAACTAGACCAAAAGATGAGGAAAAAGAAGGCTAA 4056 0.4428 MQMSQEEDSCSNTIEQWKWSEMQGLELHPHSQSSKPSQEQMGTSLSQQPNKDIDGVVDDAISNGVNGNGNGNNTSGEKKKTKAESVPPIGFVKLFRFADGLDYILMAIGTVGAIVHGCSLPIFLRFFADLVNSFGSNANDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQFFDTEVRTSDVVFAINTDAVLVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTITLAKLSGKSQESLSQAGNIAEQTVAQIRVVLAFVGESRALKAYSSALKVGQKLGYKTGFAKGIGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPSIDRNSESGLELESVTGLVELKSVNFSYPARQDVQVLNDFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQGEIEEAARVANAHSFINKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGRVSEIGTHDELFSKGENGVYAKLIKMQEIAHETAMSNARKSSARPSSARNSVSSPIITRNSSYGRSPYSHRLSDFSTSDFSLSLDASHPNYRHERLPFKEQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHRFMIRQIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESGRIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDMEAAHAKATQLAGEAIANVRTVAAFNSETKIVRLFTSNLETPLKRCFRKGQIAGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFEFLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMPVFHDLSLRARAGKTLALVGPSGCGKSSIIALIQRFYDPTSGRVLIDGKDIRRYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSHLLKNYPDGTYARMIQLQRFTNTQVIGMASGSSSSTRPKDEEKEG* 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1153 1351 Gene3D - 1076 1331 IPR027417 -
Lan5g1153 1351 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 395 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan5g1153 1351 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 430 666 IPR003439 GO:0005524
Lan5g1153 1351 SMART AAA_5 1112 1304 IPR003593 -
Lan5g1153 1351 SMART AAA_5 457 643 IPR003593 -
Lan5g1153 1351 Pfam ABC transporter transmembrane region 106 379 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan5g1153 1351 Pfam ABC transporter transmembrane region 763 1032 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan5g1153 1351 MobiDBLite consensus disorder prediction 26 51 - -
Lan5g1153 1351 ProSitePatterns ABC transporters family signature. 1224 1238 IPR017871 GO:0005524
Lan5g1153 1351 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 762 1049 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan5g1153 1351 Gene3D - 428 693 IPR027417 -
Lan5g1153 1351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 669 IPR027417 -
Lan5g1153 1351 SUPERFAMILY ABC transporter transmembrane region 749 1072 IPR036640 GO:0005524|GO:0016021
Lan5g1153 1351 MobiDBLite consensus disorder prediction 21 82 - -
Lan5g1153 1351 CDD ABC_6TM_Pgp_ABCB1_D1_like 106 403 - -
Lan5g1153 1351 Gene3D ABC transporter type 1, transmembrane domain 153 1058 IPR036640 GO:0005524|GO:0016021
Lan5g1153 1351 SUPERFAMILY ABC transporter transmembrane region 93 414 IPR036640 GO:0005524|GO:0016021
Lan5g1153 1351 Pfam ABC transporter 1104 1252 IPR003439 GO:0005524
Lan5g1153 1351 Pfam ABC transporter 448 597 IPR003439 GO:0005524
Lan5g1153 1351 CDD ABC_6TM_Pgp_ABCB1_D2_like 751 1067 - -
Lan5g1153 1351 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 106 1328 IPR039421 -
Lan5g1153 1351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1076 1324 IPR027417 -
Lan5g1153 1351 MobiDBLite consensus disorder prediction 676 701 - -
Lan5g1153 1351 ProSitePatterns ABC transporters family signature. 569 583 IPR017871 GO:0005524
Lan5g1153 1351 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1085 1321 IPR003439 GO:0005524
Lan5g1153 1351 CDD ABC_MTABC3_MDL1_MDL2 1085 1324 - -
Lan5g1153 1351 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 106 1328 - -
Lan5g1153 1351 CDD ABC_MTABC3_MDL1_MDL2 430 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1153 Lan-Chr5 24825359 24831532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1153 79 1346 Calmodulin-binding Proteins AT2G36910 88.022 0.0 2291