Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1130 ATGGAAATGCCTGCTAGAAGATCCAACTACTCGCTTCTAAGTCAACTTCCCGACGATCAATTCTCCGGAGCAACCACAACGCCGCCGTTCGATTCATCCTCCGGCGACGGTAATAATTACAATTATAATAACAGGCATGGGAATCGGATTGGGAATTTGTATCCACCGTCGATCGCGTTGCAGAGGCAATCCAGTGGGAGCAGCTTCGGCGAGAGCTCGCTTTCTGGCGAGTGTTACGTGCCTACGATTTCGAACGCGGCTGCGAACGATATCGATGGATATGGATACGGAGACGTGAGAGTTAAGCTGGCGGAGGATGTGGTGGTGAGAACAGGAGGAACGTTGGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAACTATCAGTTGCAGATGGCTTTGGCTCTTCGGCTTTCATCTGAGGCTGCATGCGCTGATGATCCTAATTTTCTGGATCCAGTGCCAGATGATTCTGCTTTGAGGTCATCGTCGTCGTTGAATTCGGAAGAGGCAGTGTCGCATAGGTTCTGGGTAAATGGCTGTCTATCATACTTCGACAAAATTCCTGATGGGTTTTACTTAATTCACGGGATGGATCCCTTTGTCTGGACCCTATGCACTGATTTGCTGGAAAATGGCCGAATTCCAACAGTTGATACACTAAAGTCAATAGATCCCTCTGCTGACTCTTCACTTGGAGTAGTTTTGGTGGATCGGCGAAGTGATGCAAGCTTAAAGGAACTGCAAAATAGAGCACATAACATTTCTTCTAGCTGCATAACGACAACAGAGGTTGTAGACCAGCTTGCCAAACTGGTTTGCAATTACATGGGGGGTTCAGCTTCTGTTAGGGAAGATGATTTTTTCCCCATCTGGAGGAACTGCATCAATTATCTGAAAGATTGCTTAAGATCTGTTGTTGTTCCAATTGGCAATTTATCTATTGGACTCTGCAGGCATCGTGCTATATTGTTCAAAGTACTAGCCGACACCATTGATATACCATGTAGAATTGCAAAGGGCTGTAAATATTGCTCCAGAGATGATGCCTCGTCATGTCTTGTCCGATTTGGGCTTGAAAGGTCATTGGCCAAACAGTATTTCTCGGACTGTCTGTCTCTTGAGCTTGTCTTTGATAATGGTTCTGCAGAACAGTTGGATGGGAAGCACAAGGATAGGAATAACCCTAGGCCAATTGCAAAAGACAGCAACATAAGTTCTATTATTCCTCTGCATCCTCAAGCTTATCATCCAAGCCCACACGATCAAGGCTCTGAAACATTTAAGTCATCTGACATAATAGAATCGACAGGCAAGGATCCACTGCCTTTAAAGCATAACCGTCCTGGTCATAGAGATATACAAACCCCATTAGCACTAACAAATTCCAATGTAGATGTTATTGAGAGTAGGAGGTTTGTTGAAGGAAGTCAACTGATTCCAAGCAAACCTACTAGAGATCTTGCCCTTGATATGGAGGATTTGGACATACCGTGGGGTGATCTTGTTTTAAAGGAGAGAATAGGATCAGGATCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGAGGTTGCTGTAAAAATTCTAATGGAACAAGATTTTTATGCTGAACGCTCCAGGGAATTCCTGAGGGAGGTTGCAATAATGAAACTCTTACGGCATCCAAACATCGTTTTATTTATGGGTGCAGTCACTCAGCCTCCTAACTTATCAATTGTCACGGAATATTTATCAAGGGGTAGCTTATATAGGCTGCTACATAAACCTGGTGCCAAAGAGATGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTATGATGTGGCTAAGGGGATGAACTATCTTCATAAACGTAATCCTCCTATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTCGTTGACAAGAAATATACAGTTAAGGTTTGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTCCGTGATGAGCCATCAAATGAGAAGTCAGATATTTACAGCTTTGGTGTAATCTTGTGGGAGCTTGCGACATTGCAACAGCCATGGAATAATTTGAATCCAGCACAGGTTGTAGCAGCTGTTGGGTTCAAGGGAAAAAGACTGGATATACCACATGACTTGAATCCCCAATTAGCCTCAATAATCGAGTCTTGCTGGGCCAATGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCCTTGAGAGTATTGCTCAAACCCCCTACACCTCAACCCGGTCGTCCAAACATGCCATTACTTGCCTGA 2328 0.4472 MEMPARRSNYSLLSQLPDDQFSGATTTPPFDSSSGDGNNYNYNNRHGNRIGNLYPPSIALQRQSSGSSFGESSLSGECYVPTISNAAANDIDGYGYGDVRVKLAEDVVVRTGGTLGKSWAQQTEENYQLQMALALRLSSEAACADDPNFLDPVPDDSALRSSSSLNSEEAVSHRFWVNGCLSYFDKIPDGFYLIHGMDPFVWTLCTDLLENGRIPTVDTLKSIDPSADSSLGVVLVDRRSDASLKELQNRAHNISSSCITTTEVVDQLAKLVCNYMGGSASVREDDFFPIWRNCINYLKDCLRSVVVPIGNLSIGLCRHRAILFKVLADTIDIPCRIAKGCKYCSRDDASSCLVRFGLERSLAKQYFSDCLSLELVFDNGSAEQLDGKHKDRNNPRPIAKDSNISSIIPLHPQAYHPSPHDQGSETFKSSDIIESTGKDPLPLKHNRPGHRDIQTPLALTNSNVDVIESRRFVEGSQLIPSKPTRDLALDMEDLDIPWGDLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFYAERSREFLREVAIMKLLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVILWELATLQQPWNNLNPAQVVAAVGFKGKRLDIPHDLNPQLASIIESCWANEPWKRPSFSSIMDSLRVLLKPPTPQPGRPNMPLLA* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1130 775 MobiDBLite consensus disorder prediction 432 454 - -
Lan5g1130 775 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1 361 759 - -
Lan5g1130 775 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1 100 360 - -
Lan5g1130 775 SMART serkin_6 501 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1130 775 PRINTS Tyrosine kinase catalytic domain signature 575 588 IPR001245 GO:0004672|GO:0006468
Lan5g1130 775 PRINTS Tyrosine kinase catalytic domain signature 616 634 IPR001245 GO:0004672|GO:0006468
Lan5g1130 775 PRINTS Tyrosine kinase catalytic domain signature 663 673 IPR001245 GO:0004672|GO:0006468
Lan5g1130 775 PRINTS Tyrosine kinase catalytic domain signature 682 704 IPR001245 GO:0004672|GO:0006468
Lan5g1130 775 PRINTS Tyrosine kinase catalytic domain signature 726 748 IPR001245 GO:0004672|GO:0006468
Lan5g1130 775 Gene3D Phosphorylase Kinase; domain 1 494 579 - -
Lan5g1130 775 MobiDBLite consensus disorder prediction 384 403 - -
Lan5g1130 775 CDD STKc_MAP3K-like 507 755 - -
Lan5g1130 775 Gene3D Transferase(Phosphotransferase) domain 1 580 764 - -
Lan5g1130 775 SUPERFAMILY Protein kinase-like (PK-like) 480 755 IPR011009 -
Lan5g1130 775 Pfam Protein tyrosine and serine/threonine kinase 502 755 IPR001245 GO:0004672|GO:0006468
Lan5g1130 775 MobiDBLite consensus disorder prediction 15 39 - -
Lan5g1130 775 ProSiteProfiles Protein kinase domain profile. 501 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1130 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Lan5g1130 775 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 361 759 - -
Lan5g1130 775 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 100 360 - -
Lan5g1130 775 ProSitePatterns Protein kinases ATP-binding region signature. 507 528 IPR017441 GO:0005524
Lan5g1130 775 Pfam Ethylene-responsive protein kinase Le-CTR1 168 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1130 Lan-Chr5 24648807 24656745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1130 1 771 MAP Kinase Kinase Kinase AT5G03730 58.701 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan5g1130 PK_Tyr_Ser-Thr 7.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1130 K14510 - gmx:100775768 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1130 5 24648807 24656745 Lan5g1130 5 24648807 24656745 ECH