Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1124 ATGGACTTTCATATGAAGCAATGGAGAAACCAGGTCCAGGTGCATGAGTCAGAGGAACAACAACATTGTACAAAGATGCCAAAACTTCACCCTGGATCCCATCAAGCTTCTGCAACATCTTCTGCACTCCCTTTGTTTTTACCTGAACCCAACACCAAAATCAGTACCTTGTCAGATTCAACATTAGCTACCACTAACAGATTTCCCAGGATGGGTAGTTATTTCAGCTTGGGACAGTGGCAGGAGCTAGAGTTACAAGCATTGATATTCAGATACATGTTGGCTGGTGCTGCTGTTCCTCATGAACTTCTTCAACCTATAAAGAAAAGTCTTATTTTTTCTCCTACTACTACACCTTATTTTCTTCATCACCATTCTATTCAACATTATCAACCTGGTGCAGAATTGATGCAATCAGGGTATTGGGGAAGAGGAGCAATGGATCCAGAACCTGGTCGGTGCCGGAGAACGGACGGGAAGAAGTGGCGGTGCTCGAGGGATGTGGTGGCGGGTCAGAAGTACTGTGAAAGACACATGCATCGTGGTAAAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCTATTACTATTGCTTCTTCATCATCTTCCATTTCTTCACCTTCTCTTGCCACTGCTTCTCTTAAATCACCTTTCGATCTCATTCATCTTAATCAATGTCCCTCAGGGACCAAGAATGAAAGCAAGAGCCTATTTGAAACCCAAGATCATGTGGGTGAGGATGGTAGATCAGGTGGCAATATGCTGAGGCATTTCTTTGATGATTGGCCAAGGTCACTGCAACAATCTTCTGATAGTGGTGGAAGGGTGAACTCAGTAACATGCCTAACTATTTCAATGCCTGAAAATACTTCTTCTGATGTGTCATTGAAATTGTCAACTGGGTATGGAGAAGAACCATGTCCAAGGAATGGGAATGTGGAACCAGAGACAGAGCAAGTGCAAGTGAATTGGGCTGGGGGATGGACTTCAACTAACCAAGTAGCTTCAATGGGAGGACCACTTGCAGAGGCATTGAGATCATCTACTTCAACTTCATCACCCACCAGTGTATTGCATCAGTTGCATGGTGGTTCTGCTTGA 1104 0.4429 MDFHMKQWRNQVQVHESEEQQHCTKMPKLHPGSHQASATSSALPLFLPEPNTKISTLSDSTLATTNRFPRMGSYFSLGQWQELELQALIFRYMLAGAAVPHELLQPIKKSLIFSPTTTPYFLHHHSIQHYQPGAELMQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGKNRSRKPVELPTPITIASSSSSISSPSLATASLKSPFDLIHLNQCPSGTKNESKSLFETQDHVGEDGRSGGNMLRHFFDDWPRSLQQSSDSGGRVNSVTCLTISMPENTSSDVSLKLSTGYGEEPCPRNGNVEPETEQVQVNWAGGWTSTNQVASMGGPLAEALRSSTSTSSPTSVLHQLHGGSA* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1124 367 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan5g1124 367 MobiDBLite consensus disorder prediction 332 367 - -
Lan5g1124 367 Pfam QLQ 75 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan5g1124 367 PANTHER GROWTH-REGULATING FACTOR 3 14 366 - -
Lan5g1124 367 MobiDBLite consensus disorder prediction 1 25 - -
Lan5g1124 367 PANTHER - 14 366 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan5g1124 367 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan5g1124 367 ProSiteProfiles WRC domain profile. 148 192 IPR014977 -
Lan5g1124 367 MobiDBLite consensus disorder prediction 1 34 - -
Lan5g1124 367 Pfam WRC 149 191 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1124 Lan-Chr5 24594137 24597047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1124 1 362 GRF Transcription Factor Family AT3G52910 48.346 2.44e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan5g1124 WRC 8.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1124 - - aip:107648821 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1124 5 24594137 24597047 Lan5g1124 5 24594137 24597047 ECH