Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1104 ATGGTGATTGGGGATTGTGAGATGAACTCTCAAGGAGATCAAGGAGAAGTTGAATCAGCACTACAAATGGAACACCACCAAGGTGGAATGAAATCATTTTCATCACTTGGAAGACAATCATCAATTTACTCACTCACCTTGGACGAGTTTCAACACACACTAGTGTCCGAGAATGGTAAGAATTTTGGTTCCATGAATATGGATGAGTTTCTCACCAGCATTTGGAATGCCGAAGACAATATTAACCAACCCATCAACAACCACAACCACAATCACAACCATAACAATATATCTCTAACCGAAACAACTTCGGCTGAGAAAGACATAACAACAATAAGGAAGCAGCCAAGTCTGCCAAGACAAGGGTCACTAACCCTTCCTGCACCACTTTGTAGGAAAACTGTGGAACAAGTTTGGTCTGAGATACACCATCAACAACAACAACATAGTAATAACAACGACAATGGGAATGTTCAGAATACCGAGGCTGCCCCTCGCCAACCAACTTTTGGAGAGATGACTTTGGAAGATTTCTTGGTTAAGGCAGGGGTAGTTAGAGAAACTTGTGCAATGAATCCTACACAAGTGTCTCACCAGCAACAACAATATGGAGTGTACACAAATAACAACACTACTATGCCACCTTTTGTTATTGGTGGTGGAGTTGGGAATGTGGTTGCGCCACCTTATACCGCGGTTGCTCAAGGAGGTGGAGAATTAGGAAATGTTAAGAAAAATAGTACTAGTGGGTATCATCCTCCACCACCACCCCCGCCTCCAGGGATTTGTTTCCCTGGAAGCAGGATGGTGAATGGAGGTGGGGGTGGATATGGGGTGGCAATGGCACCCCCACCTAATATAGGAATCGGTGGGCCCGTGAGCCCGGCTTCGTCGAATGAAAACTCTGCTGGTCAATATGGTATTGAGATGAGAGGGAGGAAGAGAATGGTAGATGGTCCTGTTGAAAAGGTGGTTGAAAGAAGGCAGAGAAGGATGATCAAGAATAGAGAATCAGCAGCCAGATCTAGAGCCAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAACTGAATATATTAAGAGAAGAAAACAACCAGCTAAAGCAGGCGCTGGCTGAGCTTGAGAGAAGAAGAAAGCAGCAGTGTTTTGAGGAAGTGAATGTGGGGATTCAAACCAAAGCTCAGAAGGCAAAAGAGAAACTTAGAGCTATGAGAAGGAACCTAAGTTGTCCTTTGTGA 1239 0.4423 MVIGDCEMNSQGDQGEVESALQMEHHQGGMKSFSSLGRQSSIYSLTLDEFQHTLVSENGKNFGSMNMDEFLTSIWNAEDNINQPINNHNHNHNHNNISLTETTSAEKDITTIRKQPSLPRQGSLTLPAPLCRKTVEQVWSEIHHQQQQHSNNNDNGNVQNTEAAPRQPTFGEMTLEDFLVKAGVVRETCAMNPTQVSHQQQQYGVYTNNNTTMPPFVIGGGVGNVVAPPYTAVAQGGGELGNVKKNSTSGYHPPPPPPPPGICFPGSRMVNGGGGGYGVAMAPPPNIGIGGPVSPASSNENSAGQYGIEMRGRKRMVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNILREENNQLKQALAELERRRKQQCFEEVNVGIQTKAQKAKEKLRAMRRNLSCPL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1104 412 Coils Coil 387 407 - -
Lan5g1104 412 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 325 377 IPR004827 GO:0003700|GO:0006355
Lan5g1104 412 Pfam bZIP transcription factor 327 379 IPR004827 GO:0003700|GO:0006355
Lan5g1104 412 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 12 411 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Lan5g1104 412 Gene3D - 325 381 - -
Lan5g1104 412 CDD bZIP_plant_BZIP46 327 381 - -
Lan5g1104 412 SUPERFAMILY Leucine zipper domain 327 377 IPR046347 GO:0003700|GO:0006355
Lan5g1104 412 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 12 411 IPR043452 GO:0003700|GO:0045893
Lan5g1104 412 Coils Coil 350 384 - -
Lan5g1104 412 MobiDBLite consensus disorder prediction 143 164 - -
Lan5g1104 412 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 330 345 IPR004827 GO:0003700|GO:0006355
Lan5g1104 412 SMART brlzneu 323 387 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1104 Lan-Chr5 24298707 24302750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1104 16 382 bZIP Transcription Factor Family AT2G36270 47.100 1.66e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan5g1104 bZIP_1 1.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1104 K14432 - gmx:100790948 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1104 5 24298707 24302750 Lan5g1104 5 24298707 24302750 ECH
Lan9g0372 9 5565786 5568379 Lan5g1104 5 24298707 24302750 LSH