Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1091 ATGGAAAATATGGCACCTGGCTATCGTTTCTACCCTACAGAAGAGGAAATTATTTCATTCTATCTTCATAACAAGCTTGAAGGATTAAAGGAGGAAATCATGAATAGGGTTATACCAGTCATTGATATATATGGCTATAACCCTTCTCAACTCCCACAAATTTCAGGAGAGGCAAGTATGAGAGACACTGAGCAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGCAAGAGGAGGAAGACCAAAGAGACTCACAACTACTGGTTTTTGGAAGGCTACAGGCTCTCCTAATCTTGTTTATTCTAAAGATAATCAATTCATTGGAATGAAAAGAACCATGGTTTTCTATACTGGAAGAGCTCAAAATGGAACAAAAACCGATTGGAAGATGAATGAGTATAAGAAAGCCATTGAAGTTAAAGCATCATCATCATCAAATAAGACTGATACTACGCAATTAAGGCATGAATTCAGCTTATGCCGAGTGTACAAGAAATCAAAGTGCTTAAGATCATTTGATAGAAGACCATCACCAAGGAGGAACACATATAATGTTCAAAATGTCCAAGATCAACATCAAATAGCTTCAACATGTTATGATCATAACACTCCTCAAATGGTATTGGAGACTGAGACAGGTGCAACAATTGCAAGATCACCTGATGAGAGTTCATCCTCTGAAGACCATGGCCAACCCTCCCATATTGTTGGGGAATCTAGTCAAATGGAGGTTGATATAAATGAGCCTTTGTTAAATTGGGAGCAAGTGGATTGGTTCTTGGGATCAGAACCATGA 798 0.3822 MENMAPGYRFYPTEEEIISFYLHNKLEGLKEEIMNRVIPVIDIYGYNPSQLPQISGEASMRDTEQWFFFIPRQESEARGGRPKRLTTTGFWKATGSPNLVYSKDNQFIGMKRTMVFYTGRAQNGTKTDWKMNEYKKAIEVKASSSSNKTDTTQLRHEFSLCRVYKKSKCLRSFDRRPSPRRNTYNVQNVQDQHQIASTCYDHNTPQMVLETETGATIARSPDESSSSEDHGQPSHIVGESSQMEVDINEPLLNWEQVDWFLGSEP* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1091 265 MobiDBLite consensus disorder prediction 217 244 - -
Lan5g1091 265 Gene3D NAC domain 13 170 IPR036093 GO:0003677|GO:0006355
Lan5g1091 265 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 259 - -
Lan5g1091 265 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Lan5g1091 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 259 - -
Lan5g1091 265 ProSiteProfiles NAC domain profile. 4 166 IPR003441 GO:0003677|GO:0006355
Lan5g1091 265 SUPERFAMILY NAC domain 3 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1091 Lan-Chr5 24226622 24229524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1091 7 259 NAC Transcription Factor Family AT5G22380 45.850 1.62e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan5g1091 NAM 2.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1091 - - lang:109348309 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1091 5 24226622 24229524 Lan5g1091 5 24226622 24229524 ECH