Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1081 ATGTCTACCTCTAGAAAGAAGCTTCTCTTGAACACAGTTTCAGTGAAACTAGGTTGTGGAAGCTGCAGAAGACCAAAGTTGAGTAACATTTTCCACCCAAAGCCAAAACCACAGAACCCCACTTACTCAAAAAACAAACTTTACAACCATTCATCTTCATCACACAGTACTACCCCAACCAAAACTACCACCACATTCTCAACATGCTACATTGATTCCTCAAACTTTTCAGAGTCAGATACTCATGTTATGGCACAGAATACAGTAGGGGGATTTGGAAGAAGTGGAAGAGAGGGTGTAGCTGTGGAGAAAGATTCTGATGACCCTTATTTGGATTTCAGACATTCCATGCTGCAAATGATATTGGAGAATGAGATAAACTCCAAAGATGATCTTAGAGAACTTCTGAACTGTTTTCTTCAGCTGAATTCACCCTATCACCATGGTGTTATAGTTAGAGCTTTCACTGAGATCTGGAATGGTGTTTTTTCTGTTAGGGCCAAGTCACCCAGGTTTCACTTCAACCGAAAGGCACGTGAGTTCTAA 546 0.4084 MSTSRKKLLLNTVSVKLGCGSCRRPKLSNIFHPKPKPQNPTYSKNKLYNHSSSSHSTTPTKTTTTFSTCYIDSSNFSESDTHVMAQNTVGGFGRSGREGVAVEKDSDDPYLDFRHSMLQMILENEINSKDDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRAKSPRFHFNRKAREF* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1081 181 Pfam Transcriptional repressor, ovate 106 162 IPR006458 -
Lan5g1081 181 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 1 167 - -
Lan5g1081 181 MobiDBLite consensus disorder prediction 27 62 - -
Lan5g1081 181 MobiDBLite consensus disorder prediction 34 62 - -
Lan5g1081 181 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Lan5g1081 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 167 IPR038933 GO:0045892
Lan5g1081 181 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1081 Lan-Chr5 24123222 24124101 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan5g1081 Ovate 9.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1081 - - gmx:106797222 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1081 5 24123222 24124101 Lan5g1081 5 24123222 24124101 ECH