Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1075 ATGAACCTTCTCATTCATCCACCGTGCACCACCCTCTTCTTCCTCTTCCTCCTCCTCAACACTTCCCTCTCCGCCACCGACCCAAACGACGTTGCAATCCTTCTCCAATTCAAGAAAACACTGAAAAACCCTGAACTTCTTTCATGGCCTGAGACCAATAACCCTGACCCATGTGGTCCTCCACAGTGGAAATACATTTTCTGCGTTGGTAACAGAGTTTCTCAGATTCAAGCTAAAAACTTGAACCTCACTGGTCCATTACCTCAAAATTTTAACCAACTCACTTTTCTCACTAACTTGGGTCTTCAGAATAATCGTCTCAATGGTCCTCTTCCAACTTTTCGTGGCTTATCTAATCTTGAAAAGGCTTTTTTGAATTACAATGATTTTGATTCTATCCCTTATGATTTCTTCGAAGGGCTAAGTAGTATAGAGGAATTTGCTTTGGATTATAACAACATTAATGCTAGTAGTGGTGGGTGGAATTTTCCTCCTTCGTTGGAGAACGCGACCCAGTTGAAGAAATTATCGTGTATGAATTGCAATTTGGTGGGTCCAATGCCTGAGTTTCTTGGAAAGTTTATATCTTTAACGGATTTGAAGCTTTCCTTGAATGATTTGACTGGAGAAATTCCTGGGAGTTTAAACGGCACAAGTTTGCAGATTCTGTGGTTGAATAATCAAAAGGGTAATGGCCTTAGTGGGAGTATTGAAGTTGTGACAACTATGGTTTCTCTTCAAAGTTTGTGGCTTCATGGTAACAAGTTCACTGGGTCAATTCCTGAGAGAGTTGGAGAATTGGTTTCTTTGAAGGATCTCAACCTCAATGGGAATAAACTTGTTGGGTTGATCCCTCAAGCTTTAGGTAATTTGCAATTGGATAATCTTGATTTGAACAATAATCACTTCATGGGTCCGATCCCGAATTTTAAAGCTGCTAAAGTTACTTATGATTTTAATGGTTTTTGTCAAACTAAGCCTGGGGTTTCATGCTCCTTTGAGGTTATGGCACTTTTGAGCTTTTTAAATGGGTTGAATTATCCTTCAAATCTGGTTAATTCGTGGACTGGTGATGACCCGTGTAAGGGGGAATGGTTTGGGATTAATTGCAATGCAAATGGAAAGGTGTCTATGATTAATTTGCCTAGTATGAAATATAATGGTACTTTGAGTCCATCGGTTGCGAATTTAGGTTCTCTTGTTGAAATCAGATTGAGGGATAATAATCTCAGTGGTATAGTGCCTAGTAATTGGACTAGCTTGACATCACTGAAATTGTTGGATCTGAGTAACAATAACATTTCCCCACCCCTGCCTGAGTTTAGTAATGCTGGCTTGAAATTCATAACTGTTGGGAATTCTCTGTTGAATGTGAACTCCGAGGCCCCTTCACCGGGGAGCAAAAGCCCTTCATTGGGGAGCAAAAGTCCTTCATCGGGGAGCAAAAGTCCTTCATCTGGATATGGAAATGATGAACCGTCATCAACGTCAAGACCAGTAGACTCGAACTCTAATTCTAGTGTTTCTCATGAATCCAAAAACTCCAAAAGGAAAGTGTTGGTTTCAATCGTGGCCCCGATTGTGGGTGTGATGGCTGCAGCTTTTGTGCTCATTCCCCTCTATGCATATTGTTTCAGGAGGAGAAAGGATAGCTTCAAGGCTGGAAGCTCACTAGTAATTCACCCTAGAGATCCATCCGATTCAGACAGTGCGGTGAAAATTGCCATTGCTAATAATAACAATGGAAGCATTTCCACTGTAATGGGAAGTGGCTCCGGGACTATAGATGGCAGTGGATCTGGGAGCTCTCATACCATTGAAGCTGGAAATCTAGTGATCTCAATTCAAGTCCTACGAAATGTGACCAAGAATTTTGCCCCCGAGAATGAGCTTGGCCGTGGTGGATTTGGCGTTGTCTATAAGGGAGAATTGGATGATGGGACTAAAATTGCTGTCAAACGAATGGAAGCTGGTGTGATAAGTAGCAAAGCCTTAGATGAATTCCAGGCTGAAATTGCAGTTCTATCAAAAGTTCGGCACCGGCATCTAGTGTCCCTTTTAGGTTATTCCGTTTCAGGAAATGAGAGAATTCTGGTTTATGAGTATATGCCACAAGGGGCTCTCAGTCAGCATCTTTTCCATTGGAAGAGCTTAAAACTGGAACCCCTTTCTTGGAAAAGGAGGCTCAATATTGCGTTGGATGTTGCTAGAGGAATGGAGTATCTTCATACACTGGCTCACCAGAGCTTCATTCACAGAGATCTTAAGTCGTCGAATATTTTGCTTGCTGATGATTTTAAAGCAAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCTGATGGAGAAAAATCTGTAGTGACCAGGCTTGCTGGGACTTTTGGATACTTGGCGCCGGAATATGCAGTCACAGGAAAAATCACTACCAAAGCAGATGTTTTTAGTTTTGGGGTTGTGCTAATGGAGTTGTTGACCGGATTGATGGCACTTGATGATGCTAGACCCGAGGAAAGCCAATACTTGGCAGCATGGTTCTGGCATATAAAATCAGATAAGGATAAACTATTAGCTGCTATTGACCCAGCCCTTGACAGAAAAGAGGAAGCGTTTGAGACCGTCTCCATCATTGCCGAGCTAGCTGGACACTGCACTGCCAGAGAACCAGGTCAGCGGCCAGATATGGGTCATGCCGTGAACGTTCTGGCTCCTCTTGTTGAAAAATGGAAACCATTTGATGACGACACTGAGGAGTTTTCCGGCATCGATTATAGTCTTCCTCTTAATCAGATGGTGAAGGGCTGGCAAGAGGCAGAGGGAAAGGACATAAGTTATGTGGACCTTGAAGACAGCAAGAGTAGTATACCGGCAAGACCTACTGGATTTGCAGATTCTTTTACTTCAGCCGATGGCCGGTAA 2916 0.4263 MNLLIHPPCTTLFFLFLLLNTSLSATDPNDVAILLQFKKTLKNPELLSWPETNNPDPCGPPQWKYIFCVGNRVSQIQAKNLNLTGPLPQNFNQLTFLTNLGLQNNRLNGPLPTFRGLSNLEKAFLNYNDFDSIPYDFFEGLSSIEEFALDYNNINASSGGWNFPPSLENATQLKKLSCMNCNLVGPMPEFLGKFISLTDLKLSLNDLTGEIPGSLNGTSLQILWLNNQKGNGLSGSIEVVTTMVSLQSLWLHGNKFTGSIPERVGELVSLKDLNLNGNKLVGLIPQALGNLQLDNLDLNNNHFMGPIPNFKAAKVTYDFNGFCQTKPGVSCSFEVMALLSFLNGLNYPSNLVNSWTGDDPCKGEWFGINCNANGKVSMINLPSMKYNGTLSPSVANLGSLVEIRLRDNNLSGIVPSNWTSLTSLKLLDLSNNNISPPLPEFSNAGLKFITVGNSLLNVNSEAPSPGSKSPSLGSKSPSSGSKSPSSGYGNDEPSSTSRPVDSNSNSSVSHESKNSKRKVLVSIVAPIVGVMAAAFVLIPLYAYCFRRRKDSFKAGSSLVIHPRDPSDSDSAVKIAIANNNNGSISTVMGSGSGTIDGSGSGSSHTIEAGNLVISIQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISSKALDEFQAEIAVLSKVRHRHLVSLLGYSVSGNERILVYEYMPQGALSQHLFHWKSLKLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFKAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDDARPEESQYLAAWFWHIKSDKDKLLAAIDPALDRKEEAFETVSIIAELAGHCTAREPGQRPDMGHAVNVLAPLVEKWKPFDDDTEEFSGIDYSLPLNQMVKGWQEAEGKDISYVDLEDSKSSIPARPTGFADSFTSADGR* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1075 971 Gene3D Ribonuclease Inhibitor 27 329 IPR032675 -
Lan5g1075 971 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 12 971 - -
Lan5g1075 971 Pfam Protein tyrosine and serine/threonine kinase 628 899 IPR001245 GO:0004672|GO:0006468
Lan5g1075 971 SMART LRR_typ_2 267 290 IPR003591 -
Lan5g1075 971 SMART LRR_typ_2 117 140 IPR003591 -
Lan5g1075 971 SMART LRR_typ_2 421 445 IPR003591 -
Lan5g1075 971 SMART LRR_typ_2 243 265 IPR003591 -
Lan5g1075 971 SMART LRR_typ_2 397 420 IPR003591 -
Lan5g1075 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Lan5g1075 971 MobiDBLite consensus disorder prediction 460 510 - -
Lan5g1075 971 Gene3D Transferase(Phosphotransferase) domain 1 703 920 - -
Lan5g1075 971 Gene3D Ribonuclease Inhibitor 333 454 IPR032675 -
Lan5g1075 971 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524
Lan5g1075 971 CDD STKc_IRAK 631 904 - -
Lan5g1075 971 ProSiteProfiles Protein kinase domain profile. 625 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1075 971 PANTHER OSJNBA0070M12.3 PROTEIN 12 971 - -
Lan5g1075 971 SUPERFAMILY Protein kinase-like (PK-like) 602 901 IPR011009 -
Lan5g1075 971 SUPERFAMILY L domain-like 334 441 - -
Lan5g1075 971 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Lan5g1075 971 Pfam Leucine rich repeat N-terminal domain 335 371 IPR013210 -
Lan5g1075 971 Gene3D Phosphorylase Kinase; domain 1 595 702 - -
Lan5g1075 971 MobiDBLite consensus disorder prediction 949 971 - -
Lan5g1075 971 SMART serkin_6 625 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1075 971 MobiDBLite consensus disorder prediction 460 512 - -
Lan5g1075 971 SUPERFAMILY L domain-like 25 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1075 Lan-Chr5 24067917 24079245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1075 83 938 Receptor kinase-like Gene Family AT1G55610 30.011 1.16e-81 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lan5g1075 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1075 - - gmx:100305366 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1075 5 24067917 24079245 Lan5g1075 5 24067917 24079245 ECH
Lan5g1075 5 24067917 24079245 Lan19g0357 19 4428687 4432625 LSH