LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan5g1067	ATGAACAACACCACTGATTCTTCTTCATTACATAGCTATATCAACCTCAATAGTTATGGCTATGGCATAGCATTTTCCATTGGAATAATCCTCCTCATTCTAACCATAAGCCTCACCTCCTATTTCTGCACCAGATCACAAATACTAACTCTTCCATCTTCTACTAGGAGACATGTTCCTAATCTTCATTTCCTTGAATCACAGCACTCAATAGTTGATGTTGGGCTAGATGAATCAACTATTTTGAGTTATCCTAAGTTGCTTTATTCTGAAGCCAAGCTCAAGAAATTATCTGATTCAACTGCAACATGTTGCACTATATGTTTGAGTGATTATATGGGAAGTGATATGATTAGGGTTTTACCAGATTGTGATCATCAATTTCATCTAAAGTGTATAGATCCATGGTTGAGGTTGCATCCTACATGTCCAGTGTGTAGAACATCTCCATTTCCAACACCATTATCAACTCCTATGGCTGAAGTTGTTCCATTTGCAAACATGCAAGATTCAAGTGCAGGATAA	525	0.3714	MNNTTDSSSLHSYINLNSYGYGIAFSIGIILLILTISLTSYFCTRSQILTLPSSTRRHVPNLHFLESQHSIVDVGLDESTILSYPKLLYSEAKLKKLSDSTATCCTICLSDYMGSDMIRVLPDCDHQFHLKCIDPWLRLHPTCPVCRTSPFPTPLSTPMAEVVPFANMQDSSAG*	175

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan5g1067	174	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	62	151	IPR013083	-
	Lan5g1067	174	CDD	RING-H2_PA-TM-RING	104	147	-	-
	Lan5g1067	174	ProSiteProfiles	Zinc finger RING-type profile.	105	147	IPR001841	-
	Lan5g1067	174	PANTHER	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	14	167	IPR045899	-
	Lan5g1067	174	PANTHER	RING-H2 FINGER PROTEIN ATL70-LIKE	14	167	-	-
	Lan5g1067	174	SMART	ring_2	105	146	IPR001841	-
	Lan5g1067	174	Pfam	Ring finger domain	105	147	IPR001841	-
	Lan5g1067	174	SUPERFAMILY	RING/U-box	104	153	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan5g1067	Lan-Chr5	23974451	23975219	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan5g1067	6	167	C3H Transcription Factor Family	AT2G35910	57.055	6.62e-52	163

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan5g1067	-		-	lang:109348287	351.673

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan5g1067	5	23974451	23975219	Lan19g0345	19	4194559	4195305	LSH