Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1016 ATGATTAGAAGGGAGTATTTGTGCCTCCTAATGTTACCTTTGCTGCTGTGTGTTTTTATCGGCTTTTTGCTACATCCGGTTGTGGCAGCAGTGATACCATTGGGTTCCAAACTTTCTGTGTTGGATAATGATTATTGGGTTTCCTCGAATGGCGATTTTGTAATTGGATTCTTTAACACTTCGGATGAACCTAACCAGTATAGTGTTGGCATTCGTTTCAATTCGAAGTCTATACCGTATAGCCAACAAAAAGTGGTTTGGGTTGCAGGAGCCCATGTCGCAGTTGGTAACGTATCCTATTTCCAACTCACCTTGGATGGAGAACTGGTCCTGTTTGATTCATTACAAGGAGCCACAACATGGACCAGTGGAACGGGGAATCGGTCTGTTGTATCAGCTTCTCTTCATGACAATGGTAATTTCGCTCTGATAGATAGAGAGCAAAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACATTACTCCCAGGACAAACATTTTCTGCTTATCAAATACTTCGTCCTGCATCGAAGAATCCCATCTCCAGCTACTACAGTCTTTACATGAATGCTTCGAGTTATTTGCAGCTTCGTTGGAAGAGTAATATTACCTACTGGGTCAGTGAAAGCCCTTCTGCTTCAAATCTCACTGCTTCTCTTACCACCAGTGGTGCTTTGCAACTTGTAGACCAAAGTTTCAAACCTGTCTGGAGTGTGTTTGGAGAAGACCACAATGATACTGTGAATTACCGGTTTCTTAAGCTAGATGCTGATGGAAATCTCCGGTTATATTCATGGATTGAAGCTTCACAATCATGGAGATCAGTCTGGCAAGCTGTCGAGAACCAGTGCAAGGTCTTTGCAACGTGTGGTGAACGTGGTATCTGTGTCTTAACTGCTTCAGGTTCTGCTGATTGCTCGTGCCCGTTTGAGAAAACTGAGAATGACAAATGTTTTGTTCCATATGAGCAAGATTGTAAATCTGGCTCTACTATGCAAACATATAAGAACATGTATCTATATGGAATTTACCCCCCTGATGATTCAGTTGTCATAAGCAGTTTACAGCGATGCCAGCAGTTGTGCTTGAATGACCTAGACTGTACGGTTGCAACCTTTACCAACGATGGTAGTCCACAATGCTCGATAAAGAAAACCGAGTATTTATCCGGCTATGCAGATCCATCTATAAGCTCAGTGTCATTTGTTAAGAAATGCTCAGGTCCGTTTGCTGTAAACCCTGATCTCATGAAATCACCTCCGCCAAAGCTGCCTCCTAGCCTTTGTGTTCGTTGTCTAATAGGAGCATCGTCGGGCACGTTTCTCATTGTTGCTATCCTCCAGCTAGGATTTGTTTTCTACATCTGCAAAAGAAAAAACTCTAATAGGAAAGAAGCCAATCCTGCTTTCACATACCCAGATTCAAAGGGCTTGGTTGTCTTATCCTTCTCAGAAATCAAGAGCCTCACCGAGGATTTCAAGAATCAAATCAGATCAAATATGTTCAAAGGCATGCTACCGAACAATTGCTTGATTGCAGTTAAAGACCTGAATGCATCGATAGAAGAAAGGAAGTTCCGGAGCGCTGTTGTGAAGATGGGGAACATCCATCACAAGAACATTGTGAAGCTGGAGGGTTATTGTTGCGAGCTTAATCATAGATTCTTAGTGTATGAATATGCCAAAAATGGTTCAGTCGATAAATACATAGATGATTCTACTCTATGCAGGAAGCTAATTTGGAGCAAGAGGATCGAAATATGCTCGAGTGTGGCGAAGGCCATATCCTATTTGCACTCTGGTTGTAGGGAGTTTGTAAGCCATGGAAACTTGAAGTGTGAGAATGTGATATTGGACGAAAACTTCGAGGCCAAGGTAACTGATTTCGGGTTCACAATAATAAATAGTGAAGCCTCATATTGCAGTGCTTCAGCTGAGAAAGATGTAGCAGATTTCGGCAATTTAGTGTTAACCTTGTTGACTGGATGTAGAGATCACGAAGAACTTTGTGAATGGACTTATAAAGAATGGATCGAAGGAAGGGCAAGCAACGTGGTTGATAAAAGAATCGACGGTGGTGCCGATTCAGAGGAACTGGAGCGCGCATTAAGAATTGCGTTTTGGTGCCTTCAAACGGAAGAACTCCGAAGGCCTTCTATGTGTGAGGTAGTAAGAGTACTAGATGGCACTTTAAGTGTTGATCCTCCACCACCTCCATTTGCCTTAGAGGAAAATGATACATAA 2247 0.4228 MIRREYLCLLMLPLLLCVFIGFLLHPVVAAVIPLGSKLSVLDNDYWVSSNGDFVIGFFNTSDEPNQYSVGIRFNSKSIPYSQQKVVWVAGAHVAVGNVSYFQLTLDGELVLFDSLQGATTWTSGTGNRSVVSASLHDNGNFALIDREQNIIWQSFDTPSDTLLPGQTFSAYQILRPASKNPISSYYSLYMNASSYLQLRWKSNITYWVSESPSASNLTASLTTSGALQLVDQSFKPVWSVFGEDHNDTVNYRFLKLDADGNLRLYSWIEASQSWRSVWQAVENQCKVFATCGERGICVLTASGSADCSCPFEKTENDKCFVPYEQDCKSGSTMQTYKNMYLYGIYPPDDSVVISSLQRCQQLCLNDLDCTVATFTNDGSPQCSIKKTEYLSGYADPSISSVSFVKKCSGPFAVNPDLMKSPPPKLPPSLCVRCLIGASSGTFLIVAILQLGFVFYICKRKNSNRKEANPAFTYPDSKGLVVLSFSEIKSLTEDFKNQIRSNMFKGMLPNNCLIAVKDLNASIEERKFRSAVVKMGNIHHKNIVKLEGYCCELNHRFLVYEYAKNGSVDKYIDDSTLCRKLIWSKRIEICSSVAKAISYLHSGCREFVSHGNLKCENVILDENFEAKVTDFGFTIINSEASYCSASAEKDVADFGNLVLTLLTGCRDHEELCEWTYKEWIEGRASNVVDKRIDGGADSEELERALRIAFWCLQTEELRRPSMCEVVRVLDGTLSVDPPPPPFALEENDT* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1016 748 CDD B_lectin 47 158 IPR001480 -
Lan5g1016 748 ProSiteProfiles Protein kinase domain profile. 484 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g1016 748 SMART blect_4 37 158 IPR001480 -
Lan5g1016 748 PIRSF SRK 638 748 IPR024171 GO:0004674
Lan5g1016 748 PIRSF SRK 3 643 IPR024171 GO:0004674
Lan5g1016 748 Gene3D Phosphorylase Kinase; domain 1 455 561 - -
Lan5g1016 748 Pfam S-locus glycoprotein domain 246 309 IPR000858 GO:0048544
Lan5g1016 748 SUPERFAMILY alpha-D-mannose-specific plant lectins 178 276 IPR036426 -
Lan5g1016 748 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Lan5g1016 748 PANTHER OS07G0415500 PROTEIN 10 746 - -
Lan5g1016 748 Gene3D Transferase(Phosphotransferase) domain 1 562 643 - -
Lan5g1016 748 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 10 746 - -
Lan5g1016 748 ProSiteProfiles PAN/Apple domain profile. 327 407 IPR003609 -
Lan5g1016 748 SMART ntp_6 328 406 IPR003609 -
Lan5g1016 748 Gene3D Transferase(Phosphotransferase) domain 1 644 736 - -
Lan5g1016 748 Pfam Protein tyrosine and serine/threonine kinase 509 645 IPR001245 GO:0004672|GO:0006468
Lan5g1016 748 Gene3D - 29 157 IPR036426 -
Lan5g1016 748 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 209 IPR036426 -
Lan5g1016 748 ProSiteProfiles Bulb-type lectin domain profile. 159 277 IPR001480 -
Lan5g1016 748 Gene3D - 159 280 IPR036426 -
Lan5g1016 748 Pfam D-mannose binding lectin 85 169 IPR001480 -
Lan5g1016 748 SUPERFAMILY Protein kinase-like (PK-like) 501 728 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1016 Lan-Chr5 23445923 23449314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1016 475 728 Receptor kinase-like Gene Family AT3G19300 32.404 1.26e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan5g1016 PK_Tyr_Ser-Thr 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1016 - - gmx:100809478 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1016 5 23445923 23449314 Lan5g1016 5 23445923 23449314 ECH