Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1009 ATGGAAGTTTTGTGCTTTTTGTTGCTGCTAGCTTGGTATGTGTCAATTTTTCACCTTGTAGGTGCTGCTGAGCTTCAAGACCAAGCTATTTTACTTGCTATCAATCAAGAGCTTAGAGTCCCTGAATGGAGTGATGGCAACACCTCAAATTACTGCACTTGGCAAGGAATCACATGTGGTAATCACTCAATGGTGGAGAAGATTGATCTAGCTCACCGGAATCTTCGAGGTAATGTAACTTTAATTTCTGAGCTCAAAGCTTTGAAGAAGCTTGACCTTTCAAACAATAACTTTGATGGTTTGATTCCTACTGCTTTTGGAAATTTATCTCATCTTGAAGTTCTAGATTTGTCTTCAAATAAGTTTAGAGGGTCAATTCCACCACAATTGGGTGTCCTTAGAAGCCTCAAGTCATTGAACCTTTCCAATAATGTCCTTGTGGGAGAGATACCAATGGAACTTCAAGGCCTAGAGGAATTGCAGGATTTTCAAATTTCTAGTAATCATTTGAGTGGTTTGATACCTTCTTGGGTGGGAAACTTGAGCTATTTGAGACTTTTTACTGCTTATGAGAATAGCTTAGGTGGTAAGATTCCGGATAGTCTCGGCATGAATTCTGAGCTTCGGATACTTAACCTGCACTCTAACCAGCTTGAAGGTCCAATACCAGCAAGCGTTTTTGCTCCAGGGAAGTTGGAAATTCTGGTTCTCACCCAGAATAATTTTAGTGGTGTTCTTCCTGATGAAATTGGGAATTGTCGAGCCCTTTCCAATGTTCGAATTGGCAACAATTATCTAGTGGGTAGTATTCCTAAGACGATTGGAAATCTTAGTGGCCTAACCTACTTTGAAGCCGACAATAACAACCTTTCTGGTGAGATAGTGTCAGAATTTTCTCGGTGTTCTAATCTGACTCTCCTGAATTTAGCTGAAAATGGATTTACTGGTATAATTCCACCAGAATTTGGAAAGCTTATGAACCTACAGGAGTTGATCCTTTCTGGAAATAGTCTCTTCGGTGATATTCCAAACTCGATTCTGGGCTGCAAAAATCTTAACAAGCTTGATATTAGCAACAACAGATTCAATGGTACAATACCAAACGAAATTTGCAGTGTCACTCGGTTGCAGTACTTGCTATTGGATCAAAATTCCATGAGAGGAGAGATCCCTCATGAAATTGGAAGTTGTGCAAAACTTCTTGAGTTACAATTGGGCAGTAATTATTTGTCTGGAACTATCCCTCCTGAGATTGGCCATATCCGGAACTTACAGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGGACCATTGCCTCCCGAATTAGGAAGACTGGACAAACTTGTTTCTCTCGATGTCTCAAACAATCGGCTCTCAGGTAATATCCCAGATGAGCTTAAGGGAATGTTGAGCTTGATTGAGGTTAACTTCTCAAATAATCTTTTCGGAGGTCCTGTACCAACATTTGTACCATTCCAGAAGTGTCCTAGTTCCAGTTTTTTGGGCAACAAGGGGCTTTGTGGAGAGCCATTAAACTCTTCATGTGGTGATATTTATGATGAGCACAAGAATTACCATCACAGGGTTTCATATAGAATCATACTGGCCGTAATTGGTTCTGGTTTGGCAGTTTTTATGTCAGTGACTGTAGTCGTCTTGCTGTTTATGATCAGAGAAAGGCAAGAAAAAGTAGCCAAAGAGGCCGACAGAATTGTTGATGACGGAGCCAATGACAAACCAACTGTAATAGCAGGGGGTGTTTTTGTTGATAATCTAAGACAAGCGATAGACCTTGATGCCGTTGTTAAAGCAACTCTTAAAGACTCTAATAAAGTCAGCAGCGGAACTTTCAGCACAGTTTATAAAGCAGTCATGCCTTCTGGGATGGTCTTATCTGTAAGGAGATTGAAGTCCATAGACAAGACAATAATCCAGCACCAGAACAAGATGATTAGAGAGCTTGAAAGGCTTGGAAAAGTTTCTCATGCTAATATAGTGCAACCCATTGGCTACGTTATTTATGAAGATGTTGCTCTTCTCTTGCATCATTATTTTCCCGATGGAACATTGGCTCAGCTTCTTCATGAATCTACCAGACAACCTGATTATCAGCCTGACTGGCCTGAGAGGCTATCCATTGCCATTGGATTGGCTGAAGGTTTGGCTTTCCTTCATCATGTGGCGATTATCCATCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAATTTTAAGCCGCTGCTTGGGGAGATCGAGATTTCAAAACTTCTTGATCCAACCAAAGGTACTGGAAGCATTAGTGCAGTTGCTGGTTCCTTTGGTTACATACCACCAGAATATGCATATACAATGCAAGTTACAGCGCCAGGAAATGTTTATAGCTATGGTGTTGTTCTTTTGGAAATCCTTACAACTCGTCAACCAGTTGATGAAGAATTTGGTGAAGGCATAGATTTGGTGAAGTGGGTTCATAGTGCTCCAATAAGAGATGAAACTCCAGAGCAGATACTTGATGCAAGGCTTAGCACAGTTTCGTTTGGTTGGAGGAAGGACATGCTTGCTGCTCTTAAGGTCGCATTGCTATGCACTGACAACACACCTGCCAAACGACCGAAAATGAAGAATGTCGTAGAAATGCTTCAAGAGATAAAGCAAAACTGA 2667 0.4076 MEVLCFLLLLAWYVSIFHLVGAAELQDQAILLAINQELRVPEWSDGNTSNYCTWQGITCGNHSMVEKIDLAHRNLRGNVTLISELKALKKLDLSNNNFDGLIPTAFGNLSHLEVLDLSSNKFRGSIPPQLGVLRSLKSLNLSNNVLVGEIPMELQGLEELQDFQISSNHLSGLIPSWVGNLSYLRLFTAYENSLGGKIPDSLGMNSELRILNLHSNQLEGPIPASVFAPGKLEILVLTQNNFSGVLPDEIGNCRALSNVRIGNNYLVGSIPKTIGNLSGLTYFEADNNNLSGEIVSEFSRCSNLTLLNLAENGFTGIIPPEFGKLMNLQELILSGNSLFGDIPNSILGCKNLNKLDISNNRFNGTIPNEICSVTRLQYLLLDQNSMRGEIPHEIGSCAKLLELQLGSNYLSGTIPPEIGHIRNLQIALNLSFNHLHGPLPPELGRLDKLVSLDVSNNRLSGNIPDELKGMLSLIEVNFSNNLFGGPVPTFVPFQKCPSSSFLGNKGLCGEPLNSSCGDIYDEHKNYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMIRERQEKVAKEADRIVDDGANDKPTVIAGGVFVDNLRQAIDLDAVVKATLKDSNKVSSGTFSTVYKAVMPSGMVLSVRRLKSIDKTIIQHQNKMIRELERLGKVSHANIVQPIGYVIYEDVALLLHHYFPDGTLAQLLHESTRQPDYQPDWPERLSIAIGLAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTKGTGSISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRQPVDEEFGEGIDLVKWVHSAPIRDETPEQILDARLSTVSFGWRKDMLAALKVALLCTDNTPAKRPKMKNVVEMLQEIKQN* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1009 888 SUPERFAMILY Protein kinase-like (PK-like) 607 883 IPR011009 -
Lan5g1009 888 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Lan5g1009 888 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 886 - -
Lan5g1009 888 Gene3D Ribonuclease Inhibitor 228 518 IPR032675 -
Lan5g1009 888 Pfam Leucine rich repeat 327 385 IPR001611 GO:0005515
Lan5g1009 888 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Lan5g1009 888 Pfam Protein tyrosine and serine/threonine kinase 610 882 IPR001245 GO:0004672|GO:0006468
Lan5g1009 888 SUPERFAMILY L domain-like 41 292 - -
Lan5g1009 888 Gene3D Transferase(Phosphotransferase) domain 1 686 888 - -
Lan5g1009 888 Gene3D Ribonuclease Inhibitor 25 175 IPR032675 -
Lan5g1009 888 PRINTS Leucine-rich repeat signature 88 101 - -
Lan5g1009 888 PRINTS Leucine-rich repeat signature 109 122 - -
Lan5g1009 888 Gene3D Phosphorylase Kinase; domain 1 580 685 - -
Lan5g1009 888 SMART LRR_typ_2 325 349 IPR003591 -
Lan5g1009 888 SMART LRR_typ_2 373 397 IPR003591 -
Lan5g1009 888 SMART LRR_typ_2 85 108 IPR003591 -
Lan5g1009 888 SMART LRR_typ_2 206 229 IPR003591 -
Lan5g1009 888 SMART LRR_typ_2 446 469 IPR003591 -
Lan5g1009 888 SMART LRR_typ_2 157 180 IPR003591 -
Lan5g1009 888 SMART LRR_typ_2 109 133 IPR003591 -
Lan5g1009 888 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 7 886 - -
Lan5g1009 888 SUPERFAMILY L domain-like 253 512 - -
Lan5g1009 888 Gene3D Ribonuclease Inhibitor 176 227 IPR032675 -
Lan5g1009 888 ProSiteProfiles Protein kinase domain profile. 607 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1009 Lan-Chr5 23376173 23380076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1009 12 887 Receptor kinase-like Gene Family AT2G41820 71.445 0.0 1274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan5g1009 PK_Tyr_Ser-Thr 3.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1009 - - gmx:100805933 1526.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1009 5 23376173 23380076 Lan5g1009 5 23376173 23380076 ECH