Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1000 ATGGGTGGTATGGTAATGGTTTGGGAAGATCTAACAGTGGAACTTCGTAGTTTTGGAGAAGATTCTTCTCAATACAAGAAGCTGCTTAATGGACTCACTGGTTTTGCTGAACCTGGTAAGATCATGGCTATCATGGGTTCTTCTGGATGCGGCAAAACTACCCTACTCGACTCTTTAGCAGGAAGAGTTTCTGCAAATGTTATAGTGACAGGTAGCATTTTAATGAACAGGAAGAAGAGAAACTTATATTGCAGAGAAGTGTCTTATGTTGCTCAAGAGGAACTTCTATTGGGCACTTTGACTGTAAGAGAAACTCTCACTTACTCTGCAAACATGAGGCTTCCTTCAAAAATGAGCAAAGAAGAGATAAAGAAAGTGGTTGAAGAAACAATAATGAAAATGGGTCTTGAAGAATGTGCAGATAATACTATTGGTAATTGGCATTTAAGGGGTCTAAGTAATGGTGAAAAAAAGAGAGTTAGTATTGGCCTTGAGATTTTAACAAAACCACATGTTTTACTTCTTGATGAACCTACTAGTGGACTTGATAGTGCATCAGCATTCTATGTAATTCAAGCTCTAAGAAACATAGCTTGTAATGGTGGAAAGATTATTATTTGTTCCATTCATCAGCCAAGTAGTGAAGTTTTTAACCTTTTTGATGATTTGCTCTTGCTCTCAAATGGGGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTCTTAAGTTTTTTGCTGATGCAGGGTTCCCTTGTCCTACTAGAAGAAATCCTTCAGATCATTTCCTTATGTGTACTAATTTGGACTTTGACTTGATTACTGAAACTTTAGCAAGATTACAATTAAGTACATTAACATCATCAAATTTTGTTGTGAAGATGAGAACAGCACAAATTAGAGCAAAACTTATTGAGAGTTTCAAATGTTCAGAACTAATGATCAATACAAGAAGAAGAATTCAAATGCTACAACCCAATGAAGAGCAAGTAATTGAGTCCAAGGTTAGAAGAAGTACCAGCTGGTGGAAGCAACTAAGGACAGTGACCCAGAGATCTTTCCTAAACATGTCTAGGGACATTGGTTACTACTCGCTAAGGATCATATTTTACATATTGGTGTCAATCACTATTGGTATCATCTTTTTTCATATAGGCACAGACAGTAACTCAATATTGTCTAGAGGAAAGTGTATATCATTCATCTATGGATTCATGATTTGTTTATCATGTGGAGGGCTACCATTTTTCATTGAAGAATTGAAGTTGTTCTATGTTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTTTTAGCAAACATTATATCATCATTCCCTTTCCTTCTTGTGATATCAATCTTCTGTGGAGTAATTATATACTTCATGGTGCAATTTCATGCTGGTGCAACTAATCTTGCATTTTTCTGCATCAACTTGTTTTGCTGTCTTTCTGTTGCTGAGACATGCATCATGACTGTAGCCTCAGTGGTTCCCAATGTCTTGATGGGCATAGGAACAGGAACTGGTGTACTAATTTTCATGATGATGCCCTCTCAAATATTCAGACGTTTACCTGATATTCCTAAGTTCTTTTGGAGATATCCCATGTCTTACCTCAGTTTTACTACTTGGGCAATGCAGGGACAGTATAAGAATGACATGCTGGGTCTTGAATTTGATCCTCTGCTACCTGGGGACCCAAAACTTAGTGGAGAACAAGTCCTTACAATAGTATTTGGGGTTCCATTGAATCATGGAAAATGGTGGGACTTAACAGCATTGATTACCTTATTAATACTTCACAGATTGATTCTTTTCTTAGTACTTAGGTATTATAAAAGACCAAAATCAACAATGCTGTGGTTTTATGCCAAGGAAAGAATGCAATTGGCAAAAAGATGTTTGATGAGTACAAACAAGAGATATATCTCTTCCAAGAACAAAGCAGCTCCTCATCCATTATCATCACAAGAGGGACTTATGTCCCCAAACTTTGCAATATAA 2004 0.3693 MGGMVMVWEDLTVELRSFGEDSSQYKKLLNGLTGFAEPGKIMAIMGSSGCGKTTLLDSLAGRVSANVIVTGSILMNRKKRNLYCREVSYVAQEELLLGTLTVRETLTYSANMRLPSKMSKEEIKKVVEETIMKMGLEECADNTIGNWHLRGLSNGEKKRVSIGLEILTKPHVLLLDEPTSGLDSASAFYVIQALRNIACNGGKIIICSIHQPSSEVFNLFDDLLLLSNGETVYFGEAKMALKFFADAGFPCPTRRNPSDHFLMCTNLDFDLITETLARLQLSTLTSSNFVVKMRTAQIRAKLIESFKCSELMINTRRRIQMLQPNEEQVIESKVRRSTSWWKQLRTVTQRSFLNMSRDIGYYSLRIIFYILVSITIGIIFFHIGTDSNSILSRGKCISFIYGFMICLSCGGLPFFIEELKLFYVERSKGHYGEAAFVLANIISSFPFLLVISIFCGVIIYFMVQFHAGATNLAFFCINLFCCLSVAETCIMTVASVVPNVLMGIGTGTGVLIFMMMPSQIFRRLPDIPKFFWRYPMSYLSFTTWAMQGQYKNDMLGLEFDPLLPGDPKLSGEQVLTIVFGVPLNHGKWWDLTALITLLILHRLILFLVLRYYKRPKSTMLWFYAKERMQLAKRCLMSTNKRYISSKNKAAPHPLSSQEGLMSPNFAI* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1000 667 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 4 639 - -
Lan5g1000 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 639 - -
Lan5g1000 667 Pfam ABC-2 type transporter 210 262 IPR043926 GO:0140359
Lan5g1000 667 Gene3D - 9 261 IPR027417 -
Lan5g1000 667 SMART AAA_5 38 230 IPR003593 -
Lan5g1000 667 MobiDBLite consensus disorder prediction 647 667 - -
Lan5g1000 667 Pfam ABC transporter 35 180 IPR003439 GO:0005524
Lan5g1000 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 253 IPR003439 GO:0005524
Lan5g1000 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 243 IPR027417 -
Lan5g1000 667 Pfam ABC-2 type transporter 343 548 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1000 Lan-Chr5 23305042 23310308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1000 36 229 Calmodulin-binding Proteins AT2G36910 29.902 8.28e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1000 - K05681 gmx:100802207 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1000 5 23305042 23310308 Lan19g0274 19 2979098 2984534 LSH