Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0998 ATGGGAACTGCTTCGAACCAGTTGAAGATTATGCTTCGCAAAAACTTTCTCCTCAAAATTCGTCATCCTTTCGTTACTTCTGCTGAGATTTTGCTTCCTACGGTTGTGATGTTGCTGTTAATAGCTGTAAGGACACAAGTGGATACTCAAATTCATCCAGCTCAACCGCACATTCAAAAGGACTTGTTTGTGGAAGTGGGGAAAGGTGTATCCCCTAACATCCAACAAGTTTTGGAGTCCTTATTGGAAAAGGGAGAGCATTTAGCTTTTGCACCAGATACCAATGAGACAAAGCTGATGATAGATGTAATGTCAACAAAATTTCCGCTGTTGAAGCTTGTTAGTGTAGTATACAAAGACGAGGTTGAGTTGGAAACCTACATCAGCTCAGAAGCTTATGGCACTTGCAATCAAGCGAGGAATTGTTCAAATCCAAAAATTAAAGGAGCTGTTGTATTTCACGAACAAGGTCCTCAGTCATTTGATTATAGCATACGCCTTAATCATACATGGGCTTTCTCCGGTTTTCCAGATGTTACGACAATAATGGACACAAATGGCCCATTTCTTAATGACTTGGAGCTTGGTGTTAGTCCTGTACCAACAATGCAATACAGCTTCAGTGGGTTTTTCACTCTCCAGCAAATGGTCGATTCCTACATAATATTCATCTCTCAGCAGTCTGATTTAAATTCCAGTATCAAAAGCGAAGATCTTCCTCTTCCAGGCTTTTATGACACCAATTTCTCTTCTAGAATTCCATGGACTCGGTTTAACCCTGCTCACATACGAATAGCTCCATTTCCCACTCGAGAGTATACAGATGACCAGTTTCAGTCAATCGTAAAGGAAGTCATGGGAATATTGTACTTACTGGGGTTTCTCTATCCAATTTCTCGCCTGATAAGTTATTCTGTGTTTGAGAAGGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAAAGATGGTATCTTTCACCTCTCTTGGTTTATTACATATGCTTTGCAGTTTGCAATATCTTCCGGGATCATTACAGCTTGCACCATAGATAGTTTATTCAAGTATAGTGATAAGACGCTGGTGTTTGCATACTTCTTCACTTTTGGGCTTAGTGCAATCATGATGTCATTTTTTATATCCACGTTTTTCAAACGGGCCAAAACAGCTGTAGCTGTTGGAACTCTGTCTTTTCTTGGTGCCTTTTTCCCTTATTACACCGTCAATGATGAGGGAGTTTCTATGTTCTTGAAGGTTATTGCTTCTTTTCTTTCACCTGTAGCCTTTGCTCTGGGGTCAGTCAACTTTGCTGATTATGAGCGTGCTCATGTTGGACTTCGATGGAGCAACATATGGCGGGAATCTTCAGGAGTGAACTTTTCGATATGTCTTCTGATGATGATACTTGATACCCTTCTATATTGTGCAATTGGTCTATATTTTGATAAGGTTCTTCCTAGGGAGTATGGATTGCGATATCCATGGACCTTTCCTTTCCAAAAAGACTTTTGGAGGAAGAAAAAAATTGTAAAACATGGTTCCTCCAGTTTTGAAGTTAAATTTTCTGGTGATAATTCTGAGTCAAAAGGGAATCTCTTGGGGAAAGATATCTCCAAATCTGCTATAGAAGCAATAAGCATAGACATGAAGCAACAGGAGCTTGATGGCAGGTGCATGCAAATAAGGAATTTGCATAAAGTATATGCTACTAAAAAAGGAGATTGTTGTGCTGTCAACTCATTAAACCTTACATTGTATGAAAATCAGATTCTTGCTCTTTTAGGACATAATGGAGCTGGGAAAAGCACAACAATCTCAATGCTCGTCGGTCTTCTTCCTCCAACTTCAGGGGATGCTTTGGTGTTCGGAAAGAACATTGTATCAGATATTGATGAGATACGGAAGATTTTGGGTGTCTGCCCACAGCATGATATACTCTTTCCTGAATTAACTGTGAGAGAGCATTTAGAACTATTTGCCACATTGAAGGGTGTGGAAGAAGACTCATTGGAGGGTGTTGTTACTAGTATGGCTGATGAGGTAGGCCTGGCTGATAAAATCAATAGTGTTGTGAGAGCTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATAGGAAACAGTAAGGTTATAGTCCTTGATGAACCTACTAGTGGAATGGATCCATACTCAATGCGCTTGACATGGCAGTTAATAAAAAAAATTAAGAAGGGAAGGATAATTCTACTAACAACACATTCTATGGATGAAGCAGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTATAAATTGTTGTGGAAGCTCTCTTTTCCTGAAGCATCATTATGGAGTTGGTTATACTTTAACTCTTGTGAAGTCAGCTCCTACTGCTTCTATAGCTGGTGATATAGTATACCGTCATGTTCCATCAGCAACCTGTGTAAGCGAGGTGGGAACTGAGATTTCCTTCAGACTTCCTCTGGCATCCTCGCCAGCCTTCGAGGGGATGTTTAGAGAAATTGAAGGTTGTATGAAAAAATCAGGTTCAAACATGGGATTGAGTAGTAGTAGTGACAAAGACAGTCTTGGTATAGAAAGCTATGGTATATCTGTCACAACCCTGGAGGAGGTATTCTTGAGAGTTGCAGGATGTGACTATAACGAAGCTGAATGTCTCGAGGAAAATAACCATTCCCTTCTATCAGACTCAGTGGCTTCTCTTGCTTCTTGTGATCGTCCATCAAAGACAATGTGTTATCCTGGAGTTTTTGGAAATTATAAGATCTTTGGTTTCATAGCTTGTTTGGTGGGAAGAGTTTGTGGTTTAATTTTTGCTATACTCATAAGTTTCATCAACTTCTTGGGCGTGCAGTGTTGTAGTTGTGGTATCATTACTAGGTCAAGATTTTGGCAACATTCTAAAGCTTTATTTATTAAGAAGGCCATAACTGCTCGGAGAGATTCCAAAACAATTATTTTCCAGCTAATGATTCCTGCTGTCTTCTTGTTTTTTGGTCTTCTATTTCTCAAGCTCAAGCCACATCCTGATCAGCAGGGGCTAACCCTATCAACTTCTTATTTTAATCCTCTTTTGAGCGGCGGGGGTGGGGGGTGTCCAATTCCTTTTAATCTATCTTTGCCAATTGCTGAAAAGGTTGCACAAAATGTTGAAGGAGGATGGATTCAAAGGTTCAAGCTAAGCTCATACAAATTCCCGAATTCAGAAAGTGCATTAGCTGATGCAGTGGAAGCAGCAGGGCCAACCCTAGGACCTGCTCTAATTTCAATGAGCGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGATATGGGGCCATTGTGATGGATGATCAGAATAATGATGGAAGCTTAGGCTACACTGTATTGCACAACTTTTCTTGTCAACATGCTGCTCCAACCTTTATCAATTTGATGAATGCTGCAATTCTTAGGCTTGCCACTCAAGACGTAAATATGACAATACAGACACGCAACCACCCTCTACCAATGACACAAAGCCAGCGTGTACAACGGCATGATCTGGATGCCTTCTCTGCTGCAATTATTGTCAATATTGCATTCTCTTTTATTCCTGCTTCATTTGCTGTTTCCATTGTTAAGGAACGTGAAGTGAAAGCTAAGCACCAACAATTAATCAGCGGGGTTTCTGTCCTTTCGTATTGGACTTCTACATTTATCTGGGACTTTTTGAGCTTCCTATTTCCGGCCACTTTTTCCATAGTTCTCTTTTACATATTTGGTCTGGATCAGTTTATTGGAGGGGTTTCTTTGTTACCAACAATCCTTATGCTTTTAGAGTATGGACTTGCAATTGCATCATCAACTTATTGCCTTACATTTTTCTTTTATGACCATACCATGGCTCAGAACGTGGTTCTCTTGGTCCACTTTTTCACTGGATTGATACTAATGGTTATCTCATTCATTATGGGACTCATACCATCCACAATAAGTGCAAATTCTGTTCTTAAGAACTTTTTCAGAATATCTCCTGGGTTTTGTTTTGCTGATGGTCTTGCTTCATTGGCTCTTCTGCGACAAGGAATGAAGGATAAAACAAGTGATGGAGTGTTTGATTGGAATGTTACTGGTGCTGCCATTTGTTATCTTGCTGTTGAGAGCTTTATTTACTTTTTGTTGACACTCTTGCTTGAAATTTTTCCTTCTCTTAAATTCACTCCATTCATGATCAAGAAGTGGTGGGAGAATATTAATATCTTCCAGCATAATACTACATATTTGGAACCTCTGCTAGAACCTTCCTCAAGAACTGTTGATAAGGACCTTGACGAAGATGTAGACGTGAAAACAGAAAGAAATAGAGTACTTTTAGGTTCCGTTGATAATTCCATTATCTACTTGCGTAATCTTCGTAAGGTGTATTCTGAAGAGAAGTATCATGAGAAGAAGATTGCAGTAGATTCATTAACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACTACAACTCTTTCTATGCTATGTGGGGAAGAAACTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCAATCCCAAGGCTGCTCGCCAATATATTGGGTACTGTCCACAATTTGATGCTCTATTGGAATATTTAACTGTCAAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTGCACAATAGACAATGTTGTTATGGAAAAGTTGGTGGAGTTTGACTTAGTGAAGCACGCTAATAAACCATCTTTTTCACTTAGTGGAGGGAATAAAAGAAAACTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTAATTCTTGATGAGCCATCCACAGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGAGGAAAGACTGCAGTAATTCTTACTACTCACAGCATGAATGAAGCTCAAGCCTTGTGTACCAGAATAGGGATAATGGTTGGTGGACGATTAAGATGCATTGGAAGCCCACAGCATCTGAAAACAAGATTTGGGAATCATCTTGAACTAGAGGTAAAACCTACTGAAGTGAGTTCTGTGGACTTACAAACACTCTGCCAAGCTATTCAGGAAAGACTTTTTCATGTCCCTTCTCATCCTAGAACCTTACTTAATGACCTTGAAATTTGCATCGGGGGAACCGACTCCATTACCTCAGAAGACACCTCTATTGCGGAGATTAGTTTGACACAAGAAATGATAGCCTTAATTGGGCTTTGGCTTGGCAACGAAGAAAGAATAAAGACACTAATCTCTTGTACACCTGTCTCTGATGGAGCTTCTCAGGAACAGTTATCAGAACAATTGTTTCGAGATGGTGGCATTCCATTGCCAGTATTTTCTGAGTGGTGGTTGTCGAAGCAAAAATTCTCAGAAATTGATTTATTTATCCTGTCTTCATTTCGTGGAGCAAGATATCAAGGGTGCAATGGTTTGAACATCAGATACCAGTTACCATATGATGAAGATTTGTCCCTGGCAGATGTTTTTGGAGTTCTTGAAGGGAACAGAAATAGATTAGGGATTGCGGAATACAGCATTAGCCAGTCAACTTTGGAGACTATATTTAACCATTTTGCAGCAAAATCATGA 5676 0.3971 MGTASNQLKIMLRKNFLLKIRHPFVTSAEILLPTVVMLLLIAVRTQVDTQIHPAQPHIQKDLFVEVGKGVSPNIQQVLESLLEKGEHLAFAPDTNETKLMIDVMSTKFPLLKLVSVVYKDEVELETYISSEAYGTCNQARNCSNPKIKGAVVFHEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSPVPTMQYSFSGFFTLQQMVDSYIIFISQQSDLNSSIKSEDLPLPGFYDTNFSSRIPWTRFNPAHIRIAPFPTREYTDDQFQSIVKEVMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSGIITACTIDSLFKYSDKTLVFAYFFTFGLSAIMMSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMFLKVIASFLSPVAFALGSVNFADYERAHVGLRWSNIWRESSGVNFSICLLMMILDTLLYCAIGLYFDKVLPREYGLRYPWTFPFQKDFWRKKKIVKHGSSSFEVKFSGDNSESKGNLLGKDISKSAIEAISIDMKQQELDGRCMQIRNLHKVYATKKGDCCAVNSLNLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKILGVCPQHDILFPELTVREHLELFATLKGVEEDSLEGVVTSMADEVGLADKINSVVRALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSINCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRHVPSATCVSEVGTEISFRLPLASSPAFEGMFREIEGCMKKSGSNMGLSSSSDKDSLGIESYGISVTTLEEVFLRVAGCDYNEAECLEENNHSLLSDSVASLASCDRPSKTMCYPGVFGNYKIFGFIACLVGRVCGLIFAILISFINFLGVQCCSCGIITRSRFWQHSKALFIKKAITARRDSKTIIFQLMIPAVFLFFGLLFLKLKPHPDQQGLTLSTSYFNPLLSGGGGGCPIPFNLSLPIAEKVAQNVEGGWIQRFKLSSYKFPNSESALADAVEAAGPTLGPALISMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLGYTVLHNFSCQHAAPTFINLMNAAILRLATQDVNMTIQTRNHPLPMTQSQRVQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWTSTFIWDFLSFLFPATFSIVLFYIFGLDQFIGGVSLLPTILMLLEYGLAIASSTYCLTFFFYDHTMAQNVVLLVHFFTGLILMVISFIMGLIPSTISANSVLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGAAICYLAVESFIYFLLTLLLEIFPSLKFTPFMIKKWWENINIFQHNTTYLEPLLEPSSRTVDKDLDEDVDVKTERNRVLLGSVDNSIIYLRNLRKVYSEEKYHEKKIAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEETPSDGTAFIFGKDICSNPKAARQYIGYCPQFDALLEYLTVKEHLELYARIKGVPDCTIDNVVMEKLVEFDLVKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLQTLCQAIQERLFHVPSHPRTLLNDLEICIGGTDSITSEDTSIAEISLTQEMIALIGLWLGNEERIKTLISCTPVSDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDLFILSSFRGARYQGCNGLNIRYQLPYDEDLSLADVFGVLEGNRNRLGIAEYSISQSTLETIFNHFAAKS* 1892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0998 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Lan5g0998 1891 ProSitePatterns ABC transporters family signature. 1600 1614 IPR017871 GO:0005524
Lan5g0998 1891 Gene3D - 1456 1705 IPR027417 -
Lan5g0998 1891 Gene3D - 547 796 IPR027417 -
Lan5g0998 1891 CDD ABC_subfamily_A 1463 1689 - -
Lan5g0998 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 798 IPR027417 -
Lan5g0998 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1462 1692 IPR027417 -
Lan5g0998 1891 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1314 1752 IPR026082 GO:0016021|GO:0055085|GO:0140359
Lan5g0998 1891 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 1317 IPR026082 GO:0016021|GO:0055085|GO:0140359
Lan5g0998 1891 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1655 1888 IPR026082 GO:0016021|GO:0055085|GO:0140359
Lan5g0998 1891 Pfam ABC-2 family transporter protein 166 481 - -
Lan5g0998 1891 Pfam ABC-2 family transporter protein 992 1394 - -
Lan5g0998 1891 CDD ABC_subfamily_A 560 781 - -
Lan5g0998 1891 SMART AAA_5 588 770 IPR003593 -
Lan5g0998 1891 SMART AAA_5 1493 1680 IPR003593 -
Lan5g0998 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1463 1701 IPR003439 GO:0005524
Lan5g0998 1891 Pfam ABC transporter 1485 1627 IPR003439 GO:0005524
Lan5g0998 1891 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Lan5g0998 1891 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524
Lan5g0998 1891 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1655 1888 - -
Lan5g0998 1891 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 6 1317 - -
Lan5g0998 1891 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1314 1752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0998 Lan-Chr5 23259204 23293730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0998 560 796 Calmodulin-binding Proteins AT2G36910 25.714 6.46e-16 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0998 K05643 - gmx:100803263 3303.46