Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0978 ATGATAAATCAGAAAGTTGTACTTGAAACTGAAGCCAACTTCAGCAATAATGATGCTAAATCTGAGAATGTAAAAGGCAAGAAGAAACTGAAGAAAATGAGATCAATAAGGCTTGTAAAGTGTTCAAGCATGAAATCATCCATTAGAGAAAAAAAATCACCTAATTACATGAAGGGTACTAGTAGTTCTCATGCAAAGGAGAGTTTGCAGATTACACAAACACTTTCCACAAAGAAGAGTTTAACAAGAGTGTATACTTTGAAACTAAAGAAAAATGTGACTAGAAAGAGTGAAATGAAGAAGAAACTAAAGTCTTCAAGATCAATGAAGTTTGCAACTTTCAAAAGCCAAAAATCAACAAGTAAGAAATCTGAATCTGAATCTGAATCTACTAGTAGTGATATACAGCTACAATCAACATATGTTGGTAACAAATCTCAAAGAGTTATTACTAGAAAATTGAGCTTGAAGCCTGTGAGGTTCTTAGCGAAAATGCCAACTTTTAAATCGAAGAATGATTCGGTTTTGCATAAAGCTACATGCTCTTCAACTCTCAAGGATTTTCATTTCCCTGATCACATTGACCTTCCACAAGAGGAAAGTGGTTCTCAAGGAGTACCAGCTATAAGGGTTTGTCCATATACTTATTGTTCTCTTCATGGTCGCCGCCATGGTGATTTGCCTCCACTGAAGCGATTTGTTTCGATGAGGAGGCGTCAGTTGAGGACACAAAAGAGTACCAAAATGGATGATTATGATAGATCTGTTAATAGATTGAAGCAGATAGGTAATTCAAGGAAAGCCACTCAGCAAAGTCGATCTGTCCAGAATGTAAAAAAGCTAGCCAGCGACTCGGGTATTAGGCCTCGTGACACTCCAAAGACTGCAGTTACTGAAGGTGGCACTTCTGGGGGAGAGGGTGAGGAAATGCACAAGTTCAGATGTGATACCGAGGTGTTTCCGAATATGACTAACATTGAGCAGGATCTCGGTAATTCTCTGGCTGTAAAAGGCTCCATTTCGCCTTCTATCAAAGACACAAATATGAGAAGTTGCTGCATCGCCACTGTAAAAGATACATCCGATTCCGAGGTCACTAAGTCAGCAAATGACAAGAATATAGCTGCCAGCAAGAAAAACGATGAAAGTGCTATTGTGGAATCGACATCAATTGATCTTCTCAAGTCTTCTGCTTCTGATATTGAGATATTGGAGGAAGAGGCAACTACCAAAGTCTATGAAGTAACGCAGACGAGTTCTGCACCGAAAGAGCCTGAGCCTGTTTGCGATACTGATGTGACATACAAGACACAGGAACGAGATCAGAAATATATAAAGAAGTGGCACTTGATGTATAAGCATGCAATATTAAGTATCACAGGGAAAGAAAATCACAAGCTTCCTTTTAATGGAAGGGACAAGGAAGGAAGAGGGCGAGATTCTCACACACTTAATGTAGGAAACAGATCTTCATGTCAGGATTGTTGTGAAACAGGTCAGGATGTGGATGATGAAAATGAGAATGTAATTGATCAGATGCAGAAAGCATTTGATGAAATTCTTCTCCAAGAACCCGAAGACCTCTTTTATGATGATGATTCCAAATCTAGAGGCATCGGTTCGGATGAGGTATTCTTAGAAAAGAGTGAAGGTGATGGAGGGAAACTATACAACTCAGCATCCAGAAAATCTCCTAAAGAAGAAACATGGCCAGAAGTTGACAATTTCGGAAGTCGTGTTGAAGAAATAACAGCACAGAAGATAGGAGCCAAAGCTGAGCAAAAAACACCAAAAAGATGGAGCAATCTGAAAAAGTTAATCCTGTTGAGAAGGTTTGTAAAGGCATTAGAGAAGGTTAGAAACTTCAACCTACAAAGACCAAGGCATTTGCCTTCGGACGCTAACTTCGAAGCAGAAAAAGTATTTCTCAAGCACCAAACAGCAGAGGAGAAAAAGAACGCTGAGGAATGGATGCTTGACTATGCACTTCGAACGGTTATTTCTAGACTTGAACCTGCTCAAAGACGAAAAGTGGCACTTCTAGCAGAAGCTTTTGAAACAATTCTGCCATTTCAAGATGCTGCAAATGGCCTGCAGTCTTTGGCAACAAAGGAAAATCGAGCAAATCCATCTCAATCGTTGGACGATTCCTCATATGATAGCAAGGAAGAAACCGACAAAGGAAAGGATTGTGGCTATTCTTCTAATATATTGCTTGGAAAAGCATTATCTTCTCATAATAGTGTTACGGGATTTGCGGATAATGCTAGTGATGATCCCATGCCTGAACTGCATGATGCTATGGTGTTTGAAGAAAGATGTGTTGACAATCCCGAGGCCAAGATGGTCAAGGATATGCCTGTATCTGGAGCTATTGATGAAGATTTCATTGGAAAGCAAAGTTTAACCAGAAATTATGACAATGAGGAGAAGATCTCAAGTGACAATGATAACATTCATCTTGAAGAGATCAAAGATTCCCGGTCGTGGTCCTTAAGTGAACTGCCTGAAATTGTAGGCAACTGCAATGAGGAGGCTACAACCAGTGAAATAGTCAATGAAGTCGCAGACGATTCGGAATCAACTTCGAATACAGAAATTCCAAATAGCAAACCTCAATCACCTGGAAGAGAATTTGAAACCAAGAATTTGATTGATGCTGATACGGAACAATTTTCTATGACAAAAAGTTTAATACTAAAAGGTCTTCCCAGATTGCTCGGATCAAATTCCGTTGGTTCAGGAGCACCTTCAGATCAATTAGATGAACCAACATTAGACAGAAAAGAAAGGATTGAAAAGGCTAGGCTGGAAACTGGGACACCAGAAGGGTTAGCTGCACCGGCCCAATCAAGAGCTCCTAAGAGGGCAGATGTTGCCGAACCTGAGACCGATATAGAGAAACACAAGTTGTGGTACTTGGTTTATAAGCACATGGTATCAGATAGTGCTGAAGATGATACCAAGATGCTAGTTGATGGGGCAGAGGAGAAAGAATCCGGGAATGAAGGCGGTAGAATAAGAGGAACTTCTGTCTCTTATGATAGTACACCTGTGATGAATGAAGATTTGCAATCCCAAGGTCATGGTGTAGCTAACCGAGAAGTTGAACTACAGCAGCTTGAAGCCATTAAGATGGTAGAAGATGCGATTGATTCAATCACTTCGGATGTTCAGGACCAGTTACCAGACAGACAGTCACTTGGTGACAACACAATTTCCGATGACTGCTCCAAACAATCCAACAGAACTGAAAGAGTGCACAGCGAAGGCCTGAACCAAAAACAAGAAAAAATGGAATTAGAAAATGAGATAGCCGAAGAACAAGAACAGGCAGCACCAAAGGAGGGAAACAAACCAAACCAACAATTGTCTAAAAGCTGGAGCAATCTTAGAAAAGTGGTCCTGCTAAGGAGATTCATCAAGGCATTGGAAAAGGTAAGGAAATTCAATCCAAGAGGACCAAGATACCTACCAATAGAACCTGATTCGGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGTTAGGAAGAAAAGGCACAGAAGAATGGATGCTTGATTACGCACTTCAACGGGTTGTTTCGAGATTAACTCCAGAAAGGAAAAGAAAAGTAGGGCTGCTAGTGGAAGCTTTTGAAACAATCATGCCAACCTTCAAAAACTGA 3669 0.4028 MINQKVVLETEANFSNNDAKSENVKGKKKLKKMRSIRLVKCSSMKSSIREKKSPNYMKGTSSSHAKESLQITQTLSTKKSLTRVYTLKLKKNVTRKSEMKKKLKSSRSMKFATFKSQKSTSKKSESESESTSSDIQLQSTYVGNKSQRVITRKLSLKPVRFLAKMPTFKSKNDSVLHKATCSSTLKDFHFPDHIDLPQEESGSQGVPAIRVCPYTYCSLHGRRHGDLPPLKRFVSMRRRQLRTQKSTKMDDYDRSVNRLKQIGNSRKATQQSRSVQNVKKLASDSGIRPRDTPKTAVTEGGTSGGEGEEMHKFRCDTEVFPNMTNIEQDLGNSLAVKGSISPSIKDTNMRSCCIATVKDTSDSEVTKSANDKNIAASKKNDESAIVESTSIDLLKSSASDIEILEEEATTKVYEVTQTSSAPKEPEPVCDTDVTYKTQERDQKYIKKWHLMYKHAILSITGKENHKLPFNGRDKEGRGRDSHTLNVGNRSSCQDCCETGQDVDDENENVIDQMQKAFDEILLQEPEDLFYDDDSKSRGIGSDEVFLEKSEGDGGKLYNSASRKSPKEETWPEVDNFGSRVEEITAQKIGAKAEQKTPKRWSNLKKLILLRRFVKALEKVRNFNLQRPRHLPSDANFEAEKVFLKHQTAEEKKNAEEWMLDYALRTVISRLEPAQRRKVALLAEAFETILPFQDAANGLQSLATKENRANPSQSLDDSSYDSKEETDKGKDCGYSSNILLGKALSSHNSVTGFADNASDDPMPELHDAMVFEERCVDNPEAKMVKDMPVSGAIDEDFIGKQSLTRNYDNEEKISSDNDNIHLEEIKDSRSWSLSELPEIVGNCNEEATTSEIVNEVADDSESTSNTEIPNSKPQSPGREFETKNLIDADTEQFSMTKSLILKGLPRLLGSNSVGSGAPSDQLDEPTLDRKERIEKARLETGTPEGLAAPAQSRAPKRADVAEPETDIEKHKLWYLVYKHMVSDSAEDDTKMLVDGAEEKESGNEGGRIRGTSVSYDSTPVMNEDLQSQGHGVANREVELQQLEAIKMVEDAIDSITSDVQDQLPDRQSLGDNTISDDCSKQSNRTERVHSEGLNQKQEKMELENEIAEEQEQAAPKEGNKPNQQLSKSWSNLRKVVLLRRFIKALEKVRKFNPRGPRYLPIEPDSEAEKVNLRHQDMLGRKGTEEWMLDYALQRVVSRLTPERKRKVGLLVEAFETIMPTFKN* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0978 1222 Coils Coil 1089 1118 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 935 962 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 855 878 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 262 281 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 262 310 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 1056 1078 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 1056 1125 - -
Lan5g0978 1222 PANTHER CALMODULIN BINDING PROTEIN PICBP 13 1219 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 702 716 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 44 71 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 855 877 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 93 136 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 702 730 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 94 108 - -
Lan5g0978 1222 MobiDBLite consensus disorder prediction 48 71 - -
Lan5g0978 1222 Pfam Plant calmodulin-binding domain 1115 1218 IPR012417 GO:0005516
Lan5g0978 1222 Pfam Plant calmodulin-binding domain 591 690 IPR012417 GO:0005516
Lan5g0978 1222 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 13 1219 IPR044681 GO:0005516
Lan5g0978 1222 MobiDBLite consensus disorder prediction 1079 1102 - -
Lan5g0978 1222 SMART CaM_binding_2 1102 1218 IPR012417 GO:0005516
Lan5g0978 1222 SMART CaM_binding_2 576 690 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0978 Lan-Chr5 23045882 23050773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0978 592 713 Calmodulin-binding Proteins AT5G04020 42.857 1.26e-19 94.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0978 5 23045882 23050773 Lan5g0978 5 23045882 23050773 ECH