Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0961 ATGGCTAGACCTGAAACCATCACTCAGAGAAACATCCACCGCCACCGCCACCACACCACCACCCCCACCATCGACGAAGAAGAAAGCTACGACGACGATGACATTAGCAGCAAGGATGGTGAAATATACAACAGAAACAGCGTCTTAGGTGGTTCCGAACAACGTAACAATCCTTCGTCGAAAAAGAAACGTGTTTCGGACGCTAAATGGGTTGAAGAATGGAACAGAATATACCTTATGGTGTGTGCAGCATCGTTATTCGTGGACCCGTTGTTCGCGTACCCGTTATCGATAAGCATGTCGAATATATGCTTGTTCATTGATGGGTGGTTCGCCGTCACCGTCACGGTGTTGCGGTGCATGACGGACATGTTTCATTTCTTGAACATGTTTCTGCAGAAAAGAACGTTTAGTAACCGTGGCAGTTACAACACTAAACGTGGTTCTCGTATCAGAGGTTTCATCCTTAATCTCCTTGTTACCCTTCCTATGCCACAGATTGCACTATGGGTGGTAATACCAGTTTTGTTGGAGAAAGGATTAATTACATTGGCGTTGATAATATACTTCATTGTTTTCATCGTTCAATACATTCCCAAAGTTTATCATGCAGCATGCGTCATGCGTAGGATGCATAATCTCAATGACTACATTTTTGGAACCGTTTGGTGGGGTTCTGCCCTTAACTTGATCGGATTATTTCTTGTTTCCCATATTGTAGGGGCATTTTGGTATTTATTAGGATTGGAAAGAGTGATGGAGTGTCTTGGTGAGAAGTGTGGTGACAAAAGTGGTTGTGGGCCAAAAATACTAAGTTGTAAACAACCTCTATACTTTGGAATCAATAATATGTTGAAAGACCAAACAAGGATGGCATGGTCTCTGAATACTGAAGCAAGGTCTACATGCTTAGAAGATGGAAAGAGCTATACTTATGGTTTTTATGCATGGGTTGTGCAACTTGTAACTGATGAAAACCGCTTGGAAAAGAGTCTTTTCTCTCTCTTCTGGGGTATCATGACTCTCTGCACTTTTGGCAACCTACAGAGCTCACCCCATTGGCTAGAAGTGGTTTTCAACATTGTTGTGTTGACTTGTGGGCTATTTCTAGTTACCATGTTGATCGGAAACATAAAGGTGTTTTTGAATACTATAACATCGAAGCCGCAAGCAATGAAATTGAGGATGATGAGCATTGACGTGTGGATGAGGAAAAAACGTTTGCCAAAAGAGATCAGAGAGCGTGTTCGCAGCTTCGAGCGGCAGCGTTGGGCTGCTACGCGTGGTGTCGAAGAATCCGAGTTGATAAACGATCTCCCTGAAGGGTTGAGAAAGGACATCAAGTATCATCTTTGCTGGGATTTAGTGAGACAGGTGCCCTTATTTCAGCATATGGATGATCAAGTCCTAGAGCACATTTGTGACCGTGTGAAGTCCGTTGCATTCACAAAGGGAGAAACAATATCTAGAGAGGGAGACTCAGTTCAAAGAATGATATTTGTGGTAAGGGGTCACCTTCAAAGCAGTCAAGAACTACATGATGGGGTGAAAAGTTACTGCATGTTAGGTCCTGGAAACTTCAGTGGTGATGAACTTCTATCATGGTGTTTAAGAAGGCCATTTATTGAAAGACTTCCACCATCTTCATCAACTTTGGTCACACTTGAAACAACAGAAGCATTTGTGCTTGAAGCATGGGATGTAAAATATGTAACACAACATTTTAGTTACACTTTTGTGAAGGAAAAGGTTATGAGAAGTGCAAGGTATTACTCACCAGGGTGGAGAACTTGGGCTGCTGTTGCAATTCAATTGGGTTGGAGAAGGTATAAGGATAGAAATAATAGCACTTTGAATACTTCTTTGTCTATTAAGAAGCCTGATAAACGCATGCCAACACCATCAATGGGAGAAGATAAACTTCGCTTCTATGCTGCTATGTTGAACTCACAAAAGCCTGGGCAAAATGACTTTGACTTCTTTGATTAG 1989 0.4218 MARPETITQRNIHRHRHHTTTPTIDEEESYDDDDISSKDGEIYNRNSVLGGSEQRNNPSSKKKRVSDAKWVEEWNRIYLMVCAASLFVDPLFAYPLSISMSNICLFIDGWFAVTVTVLRCMTDMFHFLNMFLQKRTFSNRGSYNTKRGSRIRGFILNLLVTLPMPQIALWVVIPVLLEKGLITLALIIYFIVFIVQYIPKVYHAACVMRRMHNLNDYIFGTVWWGSALNLIGLFLVSHIVGAFWYLLGLERVMECLGEKCGDKSGCGPKILSCKQPLYFGINNMLKDQTRMAWSLNTEARSTCLEDGKSYTYGFYAWVVQLVTDENRLEKSLFSLFWGIMTLCTFGNLQSSPHWLEVVFNIVVLTCGLFLVTMLIGNIKVFLNTITSKPQAMKLRMMSIDVWMRKKRLPKEIRERVRSFERQRWAATRGVEESELINDLPEGLRKDIKYHLCWDLVRQVPLFQHMDDQVLEHICDRVKSVAFTKGETISREGDSVQRMIFVVRGHLQSSQELHDGVKSYCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFVLEAWDVKYVTQHFSYTFVKEKVMRSARYYSPGWRTWAAVAIQLGWRRYKDRNNSTLNTSLSIKKPDKRMPTPSMGEDKLRFYAAMLNSQKPGQNDFDFFD* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0961 662 Gene3D Jelly Rolls 459 576 IPR014710 -
Lan5g0961 662 MobiDBLite consensus disorder prediction 1 62 - -
Lan5g0961 662 ProSiteProfiles cAMP/cGMP binding motif profile. 461 564 IPR000595 -
Lan5g0961 662 Pfam Ion transport protein 74 382 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan5g0961 662 Gene3D Helix hairpin bin 387 452 - -
Lan5g0961 662 SUPERFAMILY Voltage-gated potassium channels 73 382 - -
Lan5g0961 662 MobiDBLite consensus disorder prediction 41 56 - -
Lan5g0961 662 SUPERFAMILY cAMP-binding domain-like 387 577 IPR018490 -
Lan5g0961 662 SMART cnmp_10 461 590 IPR000595 -
Lan5g0961 662 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 656 - -
Lan5g0961 662 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 4 25 656 - -
Lan5g0961 662 CDD CAP_ED 461 565 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0961 Lan-Chr5 22799622 22806771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0961 54 659 Ion Channels AT5G54250 60.410 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0961 K05391 - zju:107430493 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0961 5 22799622 22806771 Lan9g0287 9 3765414 3773021 LSH