Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0948 ATGTTAATGATGATGAAAATTGTAAAGTTGGTTTCTTATTTTTTGGTTGTTTTTCCTATTTTGGTTAATGCCTCATTTTCAATGTACAATCCCCTTGATAATTATCTAATTGCTTGTGGTTCTTCACAAAATATCACTTTTCAAGGCCAAACTTTTGTTCCTGACTCACAACATTCTTCACTAGTGTTCCAACCTGGGAATTCTATTGTTGCCACTTCCAATTCTAGTGTTGTTCTATTTCCAATTTATCAATCAGCTAGGATTTTCACCCAGAAAGCTTCTTATACATTTGAAATTGAGCAACAAGGTAGACACTGGGTTAGGTTATATTTTTTTCCTGTTCCAAACCCTAGCCATGATTTGACTTCTACTGCTATAACTGTTGTTACTGATGATTTTGTTCTCTTGAGGAATTTCAGTTTTAGTAACTATAATGGTTATTCTATGTTTAAGGAGTATGGTATCAATGTTACATCTGATACATTAACTTTGACCTTTATTCCTTCAAATGGTTCATTAGCTTTTGTGAATGCAATTGAAGTTGTGTCTATGCCAGATGAATTGTTTGTTGATCAGGCATTGGCCCTTAACCCACCAGCCCCATTTAGTGGCCTTTCTGAATTAGCTTTTGAAACCGTTTATCGCTTAAACATAGGTGGTTCCTTGCTTAATGCCGAAAATGATACACTGGGAAGGACTTGGGAGAATGATATGAAATACCTTTATGTAAACAGCTCAGTCACTAATGTGTCAGTCAGCCCTTCCACCATTAAGTATCCGGCTGGTGTTACACCCGAGACAGCGCCAAATTCGGTCTATGCCACTGCTGAAGCAATGGGGGATGCTAATGTAGCCGATTCTAATTTCAACATTACTTGGGTCTTTCCTGTGGATCCAAACTTCTCCTATTTTATTAGGGTGCACTTTTGTGATATTATCAGCAAGTCACTGAATACTTTAGTGTTCAATTTATTCGTAAATACTGACATAGCTCTCGGATCCCTTGACATCTCGTCGATAACTAATGACTTGGCTGTGCCTTACTATAAGGACTTTGTTTCCAATGCTTCATCAGACTCTAATACTTTGATGGTTAGTGTTGGTCCTGATACAATGGCAGACATCACCAATGCCACTATGAATGGACTTGAGATACTGAAGATCAGCAATTCATTGAAGAGCTTGGATGGATTTTCTTCGGTTCGAAGTTTCCTTCCTAGTTCACAATCAAACAAGAACAAGGTAGGGATAATAGTTGGTTGTGTTGTTGGGGCTGTAGCTACCATAGCATTTGTTGGTTTGTGTTATTGCTGCTTGGTGCTGCACAATTCAAACTCGACTGAACAGGGTCGTCCATTGCTGTCTTTACCTTCCTTATATGGAAACTCTCACACCATGTCAAAGATGTCAACATCTTCACATAGGAGTGGGACCTCAAGTTTCATTTCTTTATCTTCGGTAAATCTTGGAAGAGTCTTCACTTTCCAAGAAATCCAGGATGCAAGCAATAAATTTGATGAGGGGCTTCTTCTCGGCGTTGGAGGTTTTGGCAAGGTTTATAAGGGAACGCTTGAAGATGGGACTAATGTAGCTGTTAAAAGGGGACACCCGGGATCTGAACAAGGTATTTATGAATTCAGAACAGAGATTGAAATGTTATCCAAGCTTCGCCACCGTCATCTTGTGTCTCTCATTGGTTATTGCGACGAGCGGTCAGAAATGATTCTTGTCTATGAATGCATGTCTAATGGACCCCTCAGGAGTCATTTGTATGGAACAGACCTGCCACCTCTATCATGGAAACAACGGCTCGAAATTTGCATCGGAGCAGCGAGAGGCCTTCATTATCTCCACACTGGTGCTTCTCAAAGCATCATTCACCGTGATGTGAAGACAACAAACATCCTTTTAGATGATAACTTTGTTGCTAAAGTTGCTGATTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACCGCTGTTAAAGGTAGTTTTGGTTATCTTGATCCTGAATACTTTAGAATGCAACAACTTACAGATAAGTCAGATGTGTATTCATTTGGAGTAGTTTTAATGGAAGTGTTATGCACAAGACCGGCCTTGAATCCTGTTCTACCTAGGGATCAGGTCAACATAGCTGAATGGGCAATGAAATGGCAGAAAAAAGGGACGCTTGATCAAATCATGGATCAAAAGCTGATAGGGAATGTTAATTCTGCTTCTCTTAAGAAGTTTGGGGAGACAGCCGAGAAATGCTTGGCCGAGTATGGTGTCGATAGGCCATCTATGGGGGATGTCTTGTGGAATCTTGAATATGCTTTGCGGCTACAAGAGACCGCCTCATTAGCACTCACGGAACCTGACAATAACAGCACAAACCAGATGGCTGGAATTCAGTTGACTACTCTTCAGAGTTTTGGCAACAGCCTTAGTATGATTGACGCCGGAAATTCTGCCACCGATGAAGATGCTACAACAAGTGCAGTGTTCTCACAGTTAGTAAATCCTTGTGGAAGATGA 2535 0.4055 MLMMMKIVKLVSYFLVVFPILVNASFSMYNPLDNYLIACGSSQNITFQGQTFVPDSQHSSLVFQPGNSIVATSNSSVVLFPIYQSARIFTQKASYTFEIEQQGRHWVRLYFFPVPNPSHDLTSTAITVVTDDFVLLRNFSFSNYNGYSMFKEYGINVTSDTLTLTFIPSNGSLAFVNAIEVVSMPDELFVDQALALNPPAPFSGLSELAFETVYRLNIGGSLLNAENDTLGRTWENDMKYLYVNSSVTNVSVSPSTIKYPAGVTPETAPNSVYATAEAMGDANVADSNFNITWVFPVDPNFSYFIRVHFCDIISKSLNTLVFNLFVNTDIALGSLDISSITNDLAVPYYKDFVSNASSDSNTLMVSVGPDTMADITNATMNGLEILKISNSLKSLDGFSSVRSFLPSSQSNKNKVGIIVGCVVGAVATIAFVGLCYCCLVLHNSNSTEQGRPLLSLPSLYGNSHTMSKMSTSSHRSGTSSFISLSSVNLGRVFTFQEIQDASNKFDEGLLLGVGGFGKVYKGTLEDGTNVAVKRGHPGSEQGIYEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYECMSNGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRMQQLTDKSDVYSFGVVLMEVLCTRPALNPVLPRDQVNIAEWAMKWQKKGTLDQIMDQKLIGNVNSASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALRLQETASLALTEPDNNSTNQMAGIQLTTLQSFGNSLSMIDAGNSATDEDATTSAVFSQLVNPCGR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0948 844 ProSiteProfiles Protein kinase domain profile. 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0948 844 SUPERFAMILY Protein kinase-like (PK-like) 479 776 IPR011009 -
Lan5g0948 844 Gene3D - 34 185 - -
Lan5g0948 844 Gene3D - 208 389 - -
Lan5g0948 844 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0948 844 PANTHER OS07G0166700 PROTEIN 21 833 IPR045272 GO:0004714|GO:0006468
Lan5g0948 844 Pfam Protein tyrosine and serine/threonine kinase 511 771 IPR001245 GO:0004672|GO:0006468
Lan5g0948 844 Pfam Malectin-like domain 37 387 IPR024788 -
Lan5g0948 844 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 21 833 - -
Lan5g0948 844 Gene3D Phosphorylase Kinase; domain 1 463 579 - -
Lan5g0948 844 CDD STKc_IRAK 518 776 - -
Lan5g0948 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lan5g0948 844 Gene3D Transferase(Phosphotransferase) domain 1 581 799 - -
Lan5g0948 844 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0948 Lan-Chr5 22674758 22677625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0948 29 797 Receptor kinase-like Gene Family AT2G21480 53.846 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan5g0948 Malectin_like 3.8e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0948 - - lang:109357111 1361.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0199 19 1961540 1966656 Lan5g0948 5 22674758 22677625 LSH
Lan5g0948 5 22674758 22677625 Lan9g0283 9 3717842 3721012 LSH