Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0944 ATGGAGAGCACTGATTCATCCACCGGTTCACAACAACAACCGAACCTGCCACCTGGGTTCCGGTTCCACCCCACAGATGAGGAACTCGTGGTTCACTACCTGAAGAAAAAAGCTGCCTCAGTTCCTCTTCCAGTTCATATAATTGCTGATGTTGATCTCTACAAGTTTGATCCATGGGAGCTACCAGCTAAGGCAGCGTTTGGAGAACAAGAGTGGTATTTCTTTAGTCCTAGGGATAGGAAGTACCCTAATGGTGCAAGGCCAAACAGGGCTGCAACTTCTGGGTATTGGAAAGCCACAGGGACAGATAAGCCTGTGTTAACTTCTGGTGGGACACAAAAAGTTGGTGTGAAAAAAGCTTTGGTTTTCTATGGAGGGAAGCCACCAAGAGGGATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAACAAGCCTAATAATAAGCCTCTTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTACTATGCCGAATCTACAAGAAGAACAATACACATAGGTCCCCACTAGAGCATGACAGAGAAGATTCAATGGATGAAATGATTGAAAGGATACCTCCTTCAATCAACGTGGGCCAGATGAATGCAAGGTTTCATCTTTCAAAGATGTCCACAAGCTACAGTAATTCATTGTTGGAAAATGACCAAAACTTATATGAAGAAATGGTGCTAAGTAATGGTTTAGGGTCCTCAAATTCTAAGGCACATCTTCATTTTATGCCAAATATTACTGCATCTTCAAACCCTACTAATAATTCAGCATCCAAAAGAACACTCTCTTCTTTGTATTGGAATGGTGATCAAGATGTGGCAGTGGCAGGAACTTCATCAACAAACAAAAGGTTCAGTTTAGAGAGTGTTGAACATGATGGAAGTGTTATGAGAACTGAAGAGAATAATAATAATAATAATCATAATAATAATGGTACTTCTAGCTCTTTTGTCACTATGCTTAATCAACTTCCTCAAACTCCTTCATTGCACCAACAACAAACAATGCTTGGATCAATAAATGATGGGTTACTTAGAACAACACCATATCAAATAGCAGGAATGAATTGGTATGCTTAG 1116 0.405 MESTDSSTGSQQQPNLPPGFRFHPTDEELVVHYLKKKAASVPLPVHIIADVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPLGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPLEHDREDSMDEMIERIPPSINVGQMNARFHLSKMSTSYSNSLLENDQNLYEEMVLSNGLGSSNSKAHLHFMPNITASSNPTNNSASKRTLSSLYWNGDQDVAVAGTSSTNKRFSLESVEHDGSVMRTEENNNNNNHNNNGTSSSFVTMLNQLPQTPSLHQQQTMLGSINDGLLRTTPYQIAGMNWYA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0944 371 PANTHER NAC TRANSCRIPTION FACTOR 56 1 337 - -
Lan5g0944 371 Gene3D NAC domain 25 182 IPR036093 GO:0003677|GO:0006355
Lan5g0944 371 MobiDBLite consensus disorder prediction 1 21 - -
Lan5g0944 371 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 337 - -
Lan5g0944 371 ProSiteProfiles NAC domain profile. 16 177 IPR003441 GO:0003677|GO:0006355
Lan5g0944 371 MobiDBLite consensus disorder prediction 1 18 - -
Lan5g0944 371 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lan5g0944 371 SUPERFAMILY NAC domain 10 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0944 Lan-Chr5 22594002 22596626 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0944 1 371 NAC Transcription Factor Family AT3G15510 52.163 1.76e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan5g0944 NAM 1.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0944 - - vra:106763825 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0192 19 1668080 1670749 Lan5g0944 5 22594002 22596626 LSH