Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0941 ATGCAGGTAGCTATGAATCAAAAGATGGCAGATATTGAGTCTCAAACTATTATCAAAGGAAGAGTGCATGAGAAAGCACCTAGGATTTCTCAAAAGGGAAAATGTCCGGTCATTCTTAAGTTTAGTGATGTTGTCTACAAAATTAAAACAAAAAAAGGAGGACTCTTTGATAAGAACACAAAGAAAGAAGAGAAAATGATACTGAAGGGAGTGACAGGAATTGTTGAACCTGGTGAAATGCTAGCAATGCTAGGTCCCTCTGGAAGTGGCAAAACAACTCTACTAACAGCTTTGGGAGGAAGGCTTGGAGGGAAACTTCATGGAACTATAACTTACAATGGAAAACCCTTCTCAAATGCAATTAAAAAGAACACTGGTTTTGTTACTCAAGATGATGTACTCTACCCTCACTTAACTGTCACAGAAACATTGGTGTTCACAGCACTTCTCAGATTACCCAATAGTGTCACAAAAGAAGAGAAAGTTTTGCATGCAAAAGCTGTAATAGATCAACTTGGTTTAACCAAGTGTAAAGATATCATAGTTGGAAGCCCTAATCTAAGAGGGGTTTCTGGTGGAGAGAGAAAAAGGGTTAGTATTGGACAAGAAATGCTCATAAATCCAAACTTGTTGTTTCTTGATGAACCAACTTCTGGTCTTGACTCAACCACAGCACAAAGAATTGTGTCAACTTTGTGGGAACTAGCAAGTGGAGGAAGAACTATTGTGATGACAATACACCAACCTTCTAGCAGATTATACTATATGTTTCATAAGGTGTTGCTGCTATCAGAAGGTTATACATTGTACTTTGGGAAGGGATCTGAAGCCATTGATTATTTTTCTAATGTTGGATATGCCCCAGCAATGGCTATGAACCCTTCAGATTTCCTTTTGGATCTTGCAAATGGTGTCTACATTAATGAATTGAATGAGGAGCATGCCATAGATAAACAGCAATTGGTTTCAGCATATAAGAGCAACTTTGAAGCACAATTAAAGCCAGAACTTCAACAATTCAATGACTCTGGTAAAAATCATTGTGAAATGCAAGATAGAGCCTTTGGAAAATGGCCAACAAGTTGGTCACAACAATTCTTTGTCCTATCAAGAAGATACATCAAAGAGAGAAAGTATGAGTCATTCTCTGGCCTTAGGATTTTCCAGCTCCTTGTAACATCTGTTATTGCAGGACTACTTTGGTATAAGTCTGATATTTCACATTTGCAGGATCAGATTGGGCTTCTATTCTTCATAAGTGGCTTCTGGGGATTTATCCCTCTCTTCCAAGCAATTTTCACCTTCCCTCAAGAGGTAATGATGCTACACAAAGAAAGGTCCTCTGGAATGTATAGACTCTCTTCATACTTCATGTCAAGGGTAGTATCTGACCTTCCTATGGAACTTACCCTTCCAACAATATTTCTTACCATAACATATTGGTTAGCAGGGTTGAAACCTAATATGATAAATTTCATATACACATTGTTAAGCCTCTTACTCCATGTTTTAACATCTCAAGGCCTAGGCCTTGCAATTGGTGCTCTTGTCCTAGACCAAAAATCTGCAACCACACTTGCTACAATTGTCATGTTATGTTTCAGTCTTGCTGCTGGGTTCTATGTCCAACATATGCCAAAATTTGTGGCATGGATTAAGTACATTTCCATTAACTATTACACATACCAGCTCTTTATTGGGTCTCAGTATCACATTGGTGAGAGATATCCTTGCCCTAATGGAGAGTGTCCAATTGAAGAATTTCCTTCTATAAAGCAAATGGGGTTACCTAATTTGCATGAACAAGCCATGGCTGCATTGGTTTTAGGGATAATGCTAATAGGTTACAGACTAATAGCTTATTTTGCTCTTATGAGGATTGGGGTGACAAAGAAATTAGCTTAG 1905 0.3816 MQVAMNQKMADIESQTIIKGRVHEKAPRISQKGKCPVILKFSDVVYKIKTKKGGLFDKNTKKEEKMILKGVTGIVEPGEMLAMLGPSGSGKTTLLTALGGRLGGKLHGTITYNGKPFSNAIKKNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEEKVLHAKAVIDQLGLTKCKDIIVGSPNLRGVSGGERKRVSIGQEMLINPNLLFLDEPTSGLDSTTAQRIVSTLWELASGGRTIVMTIHQPSSRLYYMFHKVLLLSEGYTLYFGKGSEAIDYFSNVGYAPAMAMNPSDFLLDLANGVYINELNEEHAIDKQQLVSAYKSNFEAQLKPELQQFNDSGKNHCEMQDRAFGKWPTSWSQQFFVLSRRYIKERKYESFSGLRIFQLLVTSVIAGLLWYKSDISHLQDQIGLLFFISGFWGFIPLFQAIFTFPQEVMMLHKERSSGMYRLSSYFMSRVVSDLPMELTLPTIFLTITYWLAGLKPNMINFIYTLLSLLLHVLTSQGLGLAIGALVLDQKSATTLATIVMLCFSLAAGFYVQHMPKFVAWIKYISINYYTYQLFIGSQYHIGERYPCPNGECPIEEFPSIKQMGLPNLHEQAMAALVLGIMLIGYRLIAYFALMRIGVTKKLA* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0941 634 CDD ABCG_EPDR 36 272 - -
Lan5g0941 634 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524
Lan5g0941 634 Pfam ABC-2 type transporter 364 570 IPR013525 GO:0016020|GO:0140359
Lan5g0941 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 283 IPR027417 -
Lan5g0941 634 Gene3D - 56 284 IPR027417 -
Lan5g0941 634 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 290 IPR003439 GO:0005524
Lan5g0941 634 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 16 628 - -
Lan5g0941 634 SMART AAA_5 77 265 IPR003593 -
Lan5g0941 634 Pfam ABC-2 type transporter 247 344 IPR043926 GO:0140359
Lan5g0941 634 Pfam ABC transporter 68 218 IPR003439 GO:0005524
Lan5g0941 634 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 16 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0941 Lan-Chr5 22533484 22538132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0941 21 304 Calmodulin-binding Proteins AT2G36910 26.897 5.34e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0941 K05681 - gmx:100816135 928.317