Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0921 ATGAAGCTTAAGGGACCAATCTTCTTTTTCTTAGTACTCTTTAGTCTCTTCTCAAGTTCTGAAGCTTACAAATTCTATATTGGTGGAAAAGATGGTTGGGTTGTGAACCCTTCTGTGGATTATAATCAATGGTCTGGAAGGAGTAGGTTCCAAGTTAGTGACTCACTAGTTTTCAAGTACAAGAAAGGCTCAAACTCAGTGTTGGAAGTGAATAAGGATGATTATGAAAAATGCAAGAAGGAGAACCCTATCAAGAAGTTTGAAGATGGTGACACTGAGTTTCAAATTGAAAGATCTGGTCCTTACTACTTCATTAGTGGAAAAGATGATAATTGTGAAAAGGGTCAGAAACTTATTGTTGTGGTTTTGGCTGTGAGATCTCCACCTCCTTATGTTCCAACACCTCCAAATGCTCCTTTGTATAGTCCTCCAAATGTTCCAAATATACCAAAAGCTCCAACACCCCCAAAAGCTCCATCACCTATATATAGTCCTCCAAGTGTTCCACAAGTTCCTTCTACACCTAAAGCTCCTTCACCCTATGTCCCAAAACCTCCACAAACTCCTTCTCCTATTCATCCTCCTCATTTTTCAACACCACCAAAAGCTCCTTATGTTCCAACACCACCACAAACTCCTTCACCAATATATCACCCTCCAAAAGCTCCTTCACCCTATGTTCCAAATCCTCCACAAGTTCCTTCTCCTATTTATCATCCTCCCATTGTACTAACTCCACAAGAAGCTCCAACACCTCCACCAACACCTCCACAAACACCTTCTCCAAGTTCTCAACCACCCCATGTAACAACACCTCCAAAAACACCCTCTCCTATTTCTCAACCTCCCTATGTTTTGTCACCTCCAAAAACACCCTCTCCAAGTTCTCAAGCTCCCTATGTAACAACACCTCCAAAAACACCCTCTCCAAGTTCTCAACCACCCTATGTGCTAACACCTCCAAAAACTTCTTCACCAAGTTCTCAACCTCCATATGTGCTAACCCCTCCAAAAACACCCTCTCCAAGTTCTCAACCTCCCTATGTTCCATCACCTCCAAAAACACCCTCTCCAATTGCTCAAGCTCCCTATGTACTATCACCTCCAAACACACCCTCTCCAATTTCTCAACCACCCTATGTAACAACACCTCCAAGCACTCCTTCTCCTATCAATCAACCACCCTATGTAACAACACCCCCAAAACCCAGTTCTCCTATTTCTCAACCTCCATATATATCAACACCTCCAAACACTCCTTCTCCTATCAATCAACCACCCTATATAACAACACCTCCAAAACCCAGTTCTCCTACTTCCCAACCTCCATATATATCAACTCCTCCACCAACCCCTTCTCCTATTTCTCAATCTCCCTATGTAACAACACCTCCTAAACCCATTTCTCCTTCTTCTCAACCTCCATATATATCATCACCTCCAACAACAACCCCATCTCCTATTTCTCAACCTCCCTATGTCTCAACACCTCCAAAAACTGCTTCTCCTACTTCTCAACCTCCACATATATCAATACCTCCACAAACTAGTTACCCCATTTCTCAACCTCCATATATTTCACAACCTCCAAAAGCTCTTTCCCCCACTTCTGAACCTCCAAACACCCCTTCTCCTATTTCTCAACCTCCCTATACCCTATCACCTTTGAACAGCCCTTCTCCATTTTCTCAATCACCTTACATTTCAACTCCTCCAAAGTCCACTTCCCCTATTTCTCAACCTCCACAAAAACCAAGAAGTGGAAGCTTTGCACCATTTTATTCAACAACATCACCATCTCCATCACCATTATACTCATCACCAACAACATCACCATCATACTCATCACCAACAACATCACCATCATACTCATCACCAACAGCATCACCATTATACTCATCACCAACAACATCACCATACCCATCACCATATGCTAACTCTGAACCTTCACTTTCTCCATCTGAATTGTCTCCTCTAGCATCAACTCCATCAAGTTATGTAGCAGAAACTCCATCACCATTATCATCATTGAGTCCCGGAGGTTCCACAACGACACCGTCGTCGAATGAAACGACGCCAACCCCACCAAGCGAAACGGCGTCTGCATGGGCTGCAACACCAAGAGGGTCATGGGTGTATTCACTTACCATTTTAGTCGGTGCAACTCTCACTACTATTCTAGGGTAG 2187 0.4326 MKLKGPIFFFLVLFSLFSSSEAYKFYIGGKDGWVVNPSVDYNQWSGRSRFQVSDSLVFKYKKGSNSVLEVNKDDYEKCKKENPIKKFEDGDTEFQIERSGPYYFISGKDDNCEKGQKLIVVVLAVRSPPPYVPTPPNAPLYSPPNVPNIPKAPTPPKAPSPIYSPPSVPQVPSTPKAPSPYVPKPPQTPSPIHPPHFSTPPKAPYVPTPPQTPSPIYHPPKAPSPYVPNPPQVPSPIYHPPIVLTPQEAPTPPPTPPQTPSPSSQPPHVTTPPKTPSPISQPPYVLSPPKTPSPSSQAPYVTTPPKTPSPSSQPPYVLTPPKTSSPSSQPPYVLTPPKTPSPSSQPPYVPSPPKTPSPIAQAPYVLSPPNTPSPISQPPYVTTPPSTPSPINQPPYVTTPPKPSSPISQPPYISTPPNTPSPINQPPYITTPPKPSSPTSQPPYISTPPPTPSPISQSPYVTTPPKPISPSSQPPYISSPPTTTPSPISQPPYVSTPPKTASPTSQPPHISIPPQTSYPISQPPYISQPPKALSPTSEPPNTPSPISQPPYTLSPLNSPSPFSQSPYISTPPKSTSPISQPPQKPRSGSFAPFYSTTSPSPSPLYSSPTTSPSYSSPTTSPSYSSPTASPLYSSPTTSPYPSPYANSEPSLSPSELSPLASTPSSYVAETPSPLSSLSPGGSTTTPSSNETTPTPPSETASAWAATPRGSWVYSLTILVGATLTTILG* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0921 728 CDD OsENODL1_like 23 123 IPR041846 -
Lan5g0921 728 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 172 - -
Lan5g0921 728 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Lan5g0921 728 MobiDBLite consensus disorder prediction 133 556 - -
Lan5g0921 728 PANTHER BLUE COPPER PROTEIN 1 172 IPR039391 GO:0009055
Lan5g0921 728 MobiDBLite consensus disorder prediction 557 703 - -
Lan5g0921 728 Gene3D - 21 127 IPR008972 -
Lan5g0921 728 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Lan5g0921 728 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Lan5g0921 728 MobiDBLite consensus disorder prediction 133 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0921 Lan-Chr5 22234186 22236870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0921 3 162 Phytocyanin Superfamily AT5G53870 50.610 7.38e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0921 - - gmx:100811987 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0166 19 1461806 1463676 Lan5g0921 5 22234186 22236870 LSH