Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0919 ATGGTGCTGCCAAGATGCTTCTTTGTAACACTTTTGCAGGAGTGTTTCTTTGCTTGCTTAGTTTACCTCTCTTTGGGTCTTAACAACCAAACACTATCATGTAACCTGAATGATTTATCAGCTTTGAAAGAATTTGCAGGTAACCTTACTAAAGGTACTATAATCACATCATGGTCCAATGATACTGTATGCTGTAATTGGATTGGAGTTGTTTGTGATAGTAATGTAACTGGTGATAGTGGAACTGGTAGAAGAGTTACTAAGTTGGTTCTGCCTGAAATGGATCTCAATGGAACTATTTCACCTTCTCTAGCTCAGCTAGATCAGCTTATTTTGTTGAATCTCTCAATCAATAATCTTGTTGGTGGAATTCCTATAGAGTTCACCAAGTTGAAGCAGTTGAGGTTTCTTGACTTGAGCCATAATATGCTGTCTGGACAAGTTTCTGGTCCACTTTCTGGTTTGGAATCAATTAAGATATTGAATGTTTCTAGCAATTTGTTTTCTGATGACCCTTTTTTCCAACTTGGAGAATTTCCGCATCTCCTTGCTCTCAACATGAGTAACAATTCATTCACTGGCAGGTTCAGTTCTCAAATTTGCAGTGCTTCTAAGGGTCTTCACACTCTTGATTTATCTGCAAATCATTTTGTTGGTGATCTTGAAGGCTTGGATAATTGCAGCACCTCTCTCAAAAAGTTGCATTTGGATTCCAATTCATTTTATGGTTCTCTTCCAGATTCATTGTATTCAATGTCAGCCTTGGAGCAATTCTCAGTCTCTGCCAACAATTTGTCTGGTATATTGAGCAAAAATCTGAGTAAGCTTTCTAGTCTAAAAGCTTTTGTGGTTTATGGAAACCAGTTTTCAGGGGAACTTCCAAATGTGTTTGGGAAACTTTTGCAGCTAGAACAATTAGTAGCACATTCCAATTCACTTTCGGGATCTTTGCCTTCCACCTTGGCTTTATGCTCAAAGCTTAGAGTTCTTGATCTTAGAAATAATTCCTTGTCGAGTACTATTGATCTTGATTTCACTAGGTTGTCGAATCTTAACACACTCGATCTTGCTAGTAATCGTCTTACGGGATACCTTCCAAGTTCCTTGGCCTATTGTCGCGAATTGAAAGTTTTAAGCCTTGCTAAGAATGAGTTAAATGGATCTATCCCTGAAAACTATGCTAACTTGACTTCACTTTCATTTGTATCCATGTCAAACAACAGCTTAGAGAACTTGTCTAGGTCACTGTCTACTCTGCGGCTTTGCAAAAACCTCACCACTCTTATCCTCACCAAGAATTTCCATGGTGAGGAAATTCCAGAAAACGTGACAGCAGGATTTGAGAGCCTTATGGTTTTAGCACTTGGGAATTGTGGTCTTAAAGGCCATATTCCTTCTTGGCTGTCGAATTGCCGGAAATTAGGAGTCCTTGATTTGTCTTGGAACCATTTGAGTGGTAGTATTCCTTCGTGGATTGGTGGAATGGACAGTTTGTTCTACTTGGATTTCTCAAACAATTCTCTCACGGGAGAAATACCGAAAAGTTTGACAGAGTTGAGGGGACTTATTTCCCCAAATTGTAGCCGGTCGAATTTCACTGCATCTGCGGGCATTCCTCTCCTTGTCAAGAGAAACAAGAGTGCTAGTGGGCTGAAATATAACCAGGCATCAAGTTTCCCTCCATCAATATACTTGAGCAACAACATGTTAACTGGAAATATTTGGCCTGAAATTGGTCATTTGAAATCACTGCATGTCTTGGACTTAAGCCGGAACAACATCACCGGTACCATTCCTAGCTCTATGTCTGAGATGGGGAACTTGGAAACATTGGATTTATCTTATAATGATCTCCACGGAACAATTCCTCCATCATTTAACAACCTCACATTCTTGTCAAAATTCAGTGTAGCATATAATCACTTGCAGGGAGCAATTCCATCGGGCGGGCAATTTTTAAGCTTCCCTAGTTCAAGCTTTGAGGGCAACCTTGGCCTTTGTCGGGACATTGATTCTCCTTGCAACGCTGTAAGTAATGGTTTTAGACACAAAATTTCTTCTGGCTCTGCCAGAAAATTTGGTATAGGAAATGTACTTGGCATAACAATCGGCATTGGGGTAGGGCTTGCACTGCTTCTTGCAGTTATTGTGGTAAAAATGTCAAAGAGGGATAAGGATAAGCCAATTGACAACAATGATGAGGAATTCAGTAGTAGGTCACACAGGTTATCTGGAGCACTTGTTTCTTCAAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTTACAGTTCCAGATTTGTTAAAATCCACAAACAATTTCAACCAAGCAAATATTGTTGGTTGCGGTGGATTTGGTCTTGTCTACAAGGCTAATCTTCCAAATGGCACAAAAGCAGCTATCAAGAAACTTTCTGGGGACTGTGGTCAGATAGAACGTGAATTCCAAGCTGAAGTAGAGGCCCTCTCAAGAGCTCAACACAAGAACCTTGTTTCCCTTAAAGGTTATTGTCGGCATGGCAACGACAGACTTCTGATTTACTCATACATGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGAAAATTCGGCTCTAACTTGGGATGTGAGACTCAAGATTGCGCAAGGCGCTGCTCGTGGATTAGCTTACTTGCACAAGGGTTGTGAACCATACATTGTGCATCGCGATGTTAAATCTAGCAACATTCTGTTGGATGATAAGTTTGAAGCACATTTGGCTGATTTTGGTCTCTCTAGGCTACTTCAACCATATGATACTCATGTCACAACAGATTTAGTCGGAACTTTAGGATACATTCCTCCAGAATATAGTCAGACACTGACAGCAACCTTCAGGGGTGATGTTTATAGTTTCGGCGTCGTTCTTCTCGAGCTTCTTACGGGTAGAAGGCCTGTAGAAGTCATCAAGGGTAAAAATTGCAGGAATCTGGTGTTTTGGGTGTCTCAAATGAAATATGAGAACAAGGAGCATGAAATTTTTGATCCAGCTATTTGGCACAAGGATCATGAGAAACAACTATTGGAGGTGCTAGCCATTACTTGTAAATGTCTAGACCAAGATCCAAGGCAGAGACCCTTCATTGAATCAGTTGTTTCATGGCTTGATGCTGTAAGTTATAATGGCCCTCAACAATGA 3171 0.4046 MVLPRCFFVTLLQECFFACLVYLSLGLNNQTLSCNLNDLSALKEFAGNLTKGTIITSWSNDTVCCNWIGVVCDSNVTGDSGTGRRVTKLVLPEMDLNGTISPSLAQLDQLILLNLSINNLVGGIPIEFTKLKQLRFLDLSHNMLSGQVSGPLSGLESIKILNVSSNLFSDDPFFQLGEFPHLLALNMSNNSFTGRFSSQICSASKGLHTLDLSANHFVGDLEGLDNCSTSLKKLHLDSNSFYGSLPDSLYSMSALEQFSVSANNLSGILSKNLSKLSSLKAFVVYGNQFSGELPNVFGKLLQLEQLVAHSNSLSGSLPSTLALCSKLRVLDLRNNSLSSTIDLDFTRLSNLNTLDLASNRLTGYLPSSLAYCRELKVLSLAKNELNGSIPENYANLTSLSFVSMSNNSLENLSRSLSTLRLCKNLTTLILTKNFHGEEIPENVTAGFESLMVLALGNCGLKGHIPSWLSNCRKLGVLDLSWNHLSGSIPSWIGGMDSLFYLDFSNNSLTGEIPKSLTELRGLISPNCSRSNFTASAGIPLLVKRNKSASGLKYNQASSFPPSIYLSNNMLTGNIWPEIGHLKSLHVLDLSRNNITGTIPSSMSEMGNLETLDLSYNDLHGTIPPSFNNLTFLSKFSVAYNHLQGAIPSGGQFLSFPSSSFEGNLGLCRDIDSPCNAVSNGFRHKISSGSARKFGIGNVLGITIGIGVGLALLLAVIVVKMSKRDKDKPIDNNDEEFSSRSHRLSGALVSSKLVLFQNSDCKDLTVPDLLKSTNNFNQANIVGCGGFGLVYKANLPNGTKAAIKKLSGDCGQIEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYMENGSLDYWLHECVDENSALTWDVRLKIAQGAARGLAYLHKGCEPYIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVFWVSQMKYENKEHEIFDPAIWHKDHEKQLLEVLAITCKCLDQDPRQRPFIESVVSWLDAVSYNGPQQ* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0919 1056 ProSitePatterns Protein kinases ATP-binding region signature. 781 804 IPR017441 GO:0005524
Lan5g0919 1056 SMART LRR_typ_2 605 628 IPR003591 -
Lan5g0919 1056 SMART LRR_typ_2 131 154 IPR003591 -
Lan5g0919 1056 SMART LRR_typ_2 581 604 IPR003591 -
Lan5g0919 1056 SMART LRR_typ_2 495 519 IPR003591 -
Lan5g0919 1056 SMART LRR_typ_2 348 371 IPR003591 -
Lan5g0919 1056 SMART LRR_typ_2 396 419 IPR003591 -
Lan5g0919 1056 Pfam Leucine rich repeat 583 642 IPR001611 GO:0005515
Lan5g0919 1056 Pfam Leucine rich repeat 326 385 IPR001611 GO:0005515
Lan5g0919 1056 ProSiteProfiles Protein kinase domain profile. 775 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0919 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 618 1049 - -
Lan5g0919 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 285 442 - -
Lan5g0919 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 460 520 - -
Lan5g0919 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 166 - -
Lan5g0919 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 564 620 - -
Lan5g0919 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 168 279 - -
Lan5g0919 1056 SUPERFAMILY L domain-like 551 675 - -
Lan5g0919 1056 SUPERFAMILY L domain-like 58 280 - -
Lan5g0919 1056 SMART serkin_6 775 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0919 1056 Gene3D Transferase(Phosphotransferase) domain 1 851 1054 - -
Lan5g0919 1056 Gene3D Ribonuclease Inhibitor 267 367 IPR032675 -
Lan5g0919 1056 SUPERFAMILY Protein kinase-like (PK-like) 757 1046 IPR011009 -
Lan5g0919 1056 PRINTS Leucine-rich repeat signature 134 147 - -
Lan5g0919 1056 PRINTS Leucine-rich repeat signature 348 361 - -
Lan5g0919 1056 CDD STKc_IRAK 781 1047 - -
Lan5g0919 1056 Gene3D Phosphorylase Kinase; domain 1 736 850 - -
Lan5g0919 1056 Gene3D Ribonuclease Inhibitor 372 680 IPR032675 -
Lan5g0919 1056 Gene3D Ribonuclease Inhibitor 33 266 IPR032675 -
Lan5g0919 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 460 520 - -
Lan5g0919 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 166 - -
Lan5g0919 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 285 442 - -
Lan5g0919 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 168 279 - -
Lan5g0919 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 564 620 - -
Lan5g0919 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 618 1049 - -
Lan5g0919 1056 Pfam Protein kinase domain 776 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0919 1056 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Lan5g0919 1056 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
Lan5g0919 1056 ProSiteProfiles Leucine-rich repeat profile. 326 347 IPR001611 GO:0005515
Lan5g0919 1056 SUPERFAMILY RNI-like 229 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0919 Lan-Chr5 22209046 22213099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0919 5 1037 Receptor kinase-like Gene Family AT1G55610 34.178 1.07e-162 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lan5g0919 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0919 - - gmx:100797812 1602.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0165 19 1445394 1449791 Lan5g0919 5 22209046 22213099 LSH