Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0917 ATGATTGCCAGAGAAATTCTCAATAAAATGAAGGAAAAAGTGTTGGGTTCATCAGATTGTGATTCAGGGAAAGGAAAGAGCAAGATGTCCAAGAACATAACTCATGGCTTTTACTTGGTAAAGGGAAGATCATATCATCCCATGGAGGACTATGTTGTTGCTCAATTTAAGAAAGTTGAAAACAATGAATTAGGTTTGTTTGCGATATTCGATGGCCATGCAGGTCACAACATTCCTAATTACTTGCGGTCTCATTTGTTCGATAATATCTTAAACGAGCCGGACTTCTGGAAAGAACCTACAGATGCTATCAAAAGAGCATATGATGTAACTGATTCCACAATTTTAGAGAAATCGGGTGAATTGGGTAGAGGCGGTTCAACTGCAGTTACAGCAATTTTGATCAATGGTCAGAAGTTAGTAGTAGCCAATATCGGAGACTCTCGTGCCGTTTTATGCAAGAATGGTGTGGCCAAACAAATATCAGTAGATCATGAGCCAATCACAGAAAGTGAGGATATAAAGAATAGGGGTGGTTTTGTATCAAGGTTTCCAGGGGATGTTCCACGAGTTGACGGGAGACTAGCAGTTTCGAGGGCATTCGGTGACAAAAGCTTGAAGAAACACTTGAGCTCAGAACCATATGTGACAGTGGAGATGATACATGATGATGCAGAGTTTATTATATTGGCCAGTGATGGATTGTGGAAGGTAATGTCAAATCAAGAAGCCGTTGATACTATCAGAGATTTAAAGGATGCTCGGTCTTCAGCGAAGCACCTTACAGAAGAAGCACTCGATAGGAAAAGCACGGATGACATATCTTGCATTGTTGTGAAATTTCAATGA 849 0.4028 MIAREILNKMKEKVLGSSDCDSGKGKSKMSKNITHGFYLVKGRSYHPMEDYVVAQFKKVENNELGLFAIFDGHAGHNIPNYLRSHLFDNILNEPDFWKEPTDAIKRAYDVTDSTILEKSGELGRGGSTAVTAILINGQKLVVANIGDSRAVLCKNGVAKQISVDHEPITESEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPYVTVEMIHDDAEFIILASDGLWKVMSNQEAVDTIRDLKDARSSAKHLTEEALDRKSTDDISCIVVKFQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0917 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Lan5g0917 282 SMART PP2C_SIG_2 50 281 IPR001932 -
Lan5g0917 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Lan5g0917 282 SMART PP2C_4 29 279 IPR001932 -
Lan5g0917 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lan5g0917 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Lan5g0917 282 Gene3D - 29 282 IPR036457 -
Lan5g0917 282 CDD PP2Cc 35 281 IPR001932 -
Lan5g0917 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Lan5g0917 282 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0917 Lan-Chr5 22201044 22204262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0917 1 282 PP2C-type Phosphatase Gene Family AT3G15260 73.356 7.62e-158 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0917 K17506 - gmx:100500617 478.018