Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0916 ATGGCTGATTTAGCGGGTCTGGTCGAGGCAACAGGGTCAAGGTTCAGTTCATTGGAGCTTATTGGGCAGGGATCATTCGGTGATGTCTACAAAGGGTTTGACAAGGAGCTCAACAGAGAAGTCGCTATCAAAGTGATTGATTTAGAAGAATCTGAGGATGAAATTGATGATATTCAAAAGGAAATTTCTGTTCTTTCACAATGTCGATCTCAATACATTACTGAGTATTATGGTTCCTACCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCTGTTGCGGATCTACTCCAATCTGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTGCGTGATTTGCTGCATGCCATTGATTACTTACATGCTGAAGGGAAAATTCATAGAGACATTAAAGCTGCAAACATATTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCCGAAGTTATTCAAAACTCAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTAGGGATCACTGTCATTGAGATGGCTAAAGGGGAGCCTCCACTTGCTGATCTCCACCCTATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCTCCGCAGCTAGATGAGCATTTTTCTCGTCCCTTGAAAGAATTTGTCTCGTTGTGTTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACACCGCTTCATTCGGAATGCTAGGGAGAGTCCAAAGCTTTCTGAAAGAATAAGGGAGCGTCCTAAATACCAAATAAGGGAGGAGGATCAGGAGACACCTAAAAATGGACAGAGAGGGATGGGGGAGGCATCTGATACTATGAAGGTTGCAAGAGATTCAAAAGGCGAACAAACTAATCGACCCAGTGATCAGGGTAAAACCATGAGAAATTCTGGATGGGACTTCAGCATTGGCGCATCACAGGGTACTGGAACCTTTCGTAGTGTTTCACGGCCACCTCAATTTAGAGATAAGAAACCTGAAGTTTCACATAATCAGCTTATCCAAAGAAAAGCTCCAGAGAGTGGCTATCAAGAGGGTTCAGCCAATAGAAGTGCACTTAACGAATCACTTGAAAGTTCCTTTGGAAAAGATCCTAGAGTTTCCTACCATGATGAGCATCTGGCTAATCTTGAAGATGATGAATTGTCTGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAGGCCGTCAGGGTCTCTTGACCACTCATCCCAGTCTAGCAGCAGCCATGCTTCTTTTGAAGATACTTCTACCAGTGGAACTGTTGTTTTGCGTAACCAGCGTGACTATTCTGGTTCTTCAGAGACAAGTTCCCGACTGGGACTTCATGAGAGAAATTCAAATAGCTCATGGGAAGACAGTGCTGCAAATCTTGCCGAGGCAAAGGCTGCTATCCAAGGAGGACTAAGGAAAGGCAATGCTCGTGAGAGACTTGCAATGGGGAAAATTAACAATCAACAAGAAAGCAAGAGAGAAATGACAAGCAGCTCTGGTTCTTCGAGATCATCACAAAAGGGCATGTCAAGATCGCATTATTCTAGTGGTGATGAAGAAAGTGCAAAAATAATGTCGTCCTCTGTGCCGTTATCAGCTTTGCTTATTCCTTCACTAAAAGAGGCTATTGCTGATGATCCAGAAGGCTCAATTGTGCAAGCAGTTATCAATTCTCTCATAAACATGGAGAACACAAAGCCTAGATCCTCTGATGTTCTTGTCAGAAAGTTGCTTCAACAGTTGGCAAGTTCAAAGGAAGATTCATTGAAAGACCTGCAGGAATTTGCAGGCCAACTATTCAACAAGACCAAGTCAGCTGATACAGACTCCGGTAGCCGCAAGAAACAACAGAATAAGGACCTTCATCCAAATAGCAATTTAAGCCCACTTGCCAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCAAGGGATCTAAATCCATCTTGA 2061 0.4299 MADLAGLVEATGSRFSSLELIGQGSFGDVYKGFDKELNREVAIKVIDLEESEDEIDDIQKEISVLSQCRSQYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHAEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITVIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAERPSAKELLKHRFIRNARESPKLSERIRERPKYQIREEDQETPKNGQRGMGEASDTMKVARDSKGEQTNRPSDQGKTMRNSGWDFSIGASQGTGTFRSVSRPPQFRDKKPEVSHNQLIQRKAPESGYQEGSANRSALNESLESSFGKDPRVSYHDEHLANLEDDELSGSGTVVIRSPKGSRPSGSLDHSSQSSSSHASFEDTSTSGTVVLRNQRDYSGSSETSSRLGLHERNSNSSWEDSAANLAEAKAAIQGGLRKGNARERLAMGKINNQQESKREMTSSSGSSRSSQKGMSRSHYSSGDEESAKIMSSSVPLSALLIPSLKEAIADDPEGSIVQAVINSLINMENTKPRSSDVLVRKLLQQLASSKEDSLKDLQEFAGQLFNKTKSADTDSGSRKKQQNKDLHPNSNLSPLARFLLSRWQGQTSRDLNPS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0916 686 MobiDBLite consensus disorder prediction 507 558 - -
Lan5g0916 686 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lan5g0916 686 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
Lan5g0916 686 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0916 686 CDD STKc_MST3_like 13 287 - -
Lan5g0916 686 MobiDBLite consensus disorder prediction 308 322 - -
Lan5g0916 686 MobiDBLite consensus disorder prediction 275 493 - -
Lan5g0916 686 MobiDBLite consensus disorder prediction 323 353 - -
Lan5g0916 686 MobiDBLite consensus disorder prediction 426 493 - -
Lan5g0916 686 MobiDBLite consensus disorder prediction 519 549 - -
Lan5g0916 686 MobiDBLite consensus disorder prediction 275 298 - -
Lan5g0916 686 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 684 - -
Lan5g0916 686 MobiDBLite consensus disorder prediction 371 395 - -
Lan5g0916 686 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0916 686 MobiDBLite consensus disorder prediction 637 665 - -
Lan5g0916 686 SUPERFAMILY Protein kinase-like (PK-like) 13 292 IPR011009 -
Lan5g0916 686 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0916 686 MobiDBLite consensus disorder prediction 401 416 - -
Lan5g0916 686 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 684 - -
Lan5g0916 686 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0916 Lan-Chr5 22186881 22198682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0916 1 683 MAP Kinase Kinase Kinase Kinase AT3G15220 63.453 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lan5g0916 Pkinase 3.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0916 K08838 - gmx:100815042 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0161 19 1404271 1425559 Lan5g0916 5 22186881 22198682 LSH