Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0910 ATGCGATCCAGTTCGTCATTGGAGGAGAGCAACATTGTTCGTTCATCACGGCTTCGAAAGAAGCACAAGAGGTTGGATGCAATATATGAGGATGAGCACAATCGGAGCCATGGTGAGTTCAATGATGATGTTGTTTTGAGGCATGATGCAGGGATTCGCCGCAGTTCCCGTGTTCGGCGTGCCCCGGAATTGCTAGATGCCTCTCCTCCTCCACCGAAGAAACGCCGGAGATTAGGGGATAATGGAATAAAGGGGTGTGTGGAGGTTGCTAAGAGTTTAGAGAGGGAAAATGGGAGTCCTAGCGGTGTCAAGGAGAGTCCAGGGACATGGGGTTCAAGGTTGAGATCACGGGTTAGGAATGTAGGTGTTGAAGTGAAGGAGAAGAAGGAATCTAGGGTTAGGAATGATGGTTTTGAGTTGAAGGGGGAGAGAAAATCTCGCCGTGGGAAAAGGAAGCTTTTTGATGATGCGGTTGGAAGTGCGGATGATGAGGAGTTGGAGGTTGTAGAGATAGATACCGAAGAGGAGTTGGAGGATGTAGAGGTAGATGGCATAGAGAAATTGGAAGGTTCCATGCCGAAGATAGTTAAGTCTAAGAGACCAGGAAGGATCAAGGCCGCGAAGAATGATTCTCATGGCAGTTTAGATGAGAGTAAGAGTGAAGAAGCGGAGTTTGTATTGGAAAAAGATAATGATGAGGAGACTGCTTCAATTCCGGAAAATGAGTTGTCCGGAGGGAAAGACATATTGGATGAAAGTGCCCCTCTGACGATAGAGAATGCGACAAACATGTCAAGCAATTTGCAAAGCGAGGAGTATGGCGGCAGCATCGAACCATCTACGGTGGAATGTCTAGATAAATTGGATGATCAGTTAGGGAGTGAAAAGGAAGGGCAAAATGCCAGTGATGCAGCTGAAATTGCTGGAATTTCGACAAAACAAGTAAGAAATGAAGGAACTGTTCACGAGGAGGCTAACATTGATGAAAATAACTTGAAAGATGTATGTACTGTGAGGACGGATGAGTTGAAACAGGCTTCAATTGATAAGGCTGGCCTCCGACGTATCAAAGAGGGTAGACGATGTGGTTTGTGTGGTGGAGGGACTGATGGCAAGCCTCCAAAAAGGTTAGCTTATGATAATGGTGAGAGTGAGAATGAGGCATATAGTGGGTCTTCTGCTTCAGAGGAGCCTAATTATGATGTCTGGGACGGTTTCGGTGATGAACCTGGTTGGCTTGGCCGTCTCTTGGGTCCTACTAATGATCGTGATGGTATTGCTAGAATATGGGTGCATCAGCTATGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGAGCTGCACTTTGCAGAGGAAGAGCATTGAAGTGCACTCGTTGTGGGAGGCGAGGGGCAACCATTGGTTGTCGTGTCGATCGTTGTCCAAAAACTTATCACTTGTCTTGTGCAAGAGCAAATGGTTGCATCTTTGATCATCGTAAATTTCTTATTGCCTGCACAGACCATCGTCATTTTTTCCAACCTCATGGCACTAAATATTTAGCTCACATGAGGGGTAGGAAAATGAAGTTAGAGATGAAAAAGCGCTCAAATGATGCTCTGAGAAAGGATATTGGCGAAGAAGAGAGATGGTTGGAAAATTGTGGCGATGATGAAGAGTTTTTGAAACGTGAGAGCAAGAGGCTTCACCGCGATTTATTGAGAATAGCTCCAGTTTACATCGGAGGCTCCGACTCTGCCCCTGAAAAACCATTTCAGGGATGGGAAGCTGTTGCTGGGCTTAAAGACGTCATCCGGTGTTTGAAAGAAGTTGTTATTATGCCTCTACTATATCCCGAACTCTTTGATAATTTAGGGCTTACACCCCCAAGAGGTGTTCTTTTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTTCGAGCATTGATAGGTGCATGTGCTCGTGGCGATAAACGGATTGCATATTTTGCTCGTAAAGGTGCAGATTGCTTGGGGAAATATGTGGGAGATGCTGAGCGCCAACTAAGACTGTTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAGATTGATGGACTGGCACCATGCCGTACTAGGCATCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGTTCAGTTATTGTTATAGGGGCAACAAACCGTCCTGATGCTGTTGACCCAGCACTTAGGCGCCCTGGAAGGTTTGATAGGGAAATTTATTTTCCATTGCCATCAGTTGAGGACAGAGCTTCCATTCTCTCAGTTCACACCCAGAGGTGGCCAAAACCAATTAGTGGATCGTTGCATGAGTGGATTGCAAGAAAAACTCTTGGTTATGCTGGTGCAGATCTCCAGGCTCTTTGTACTCAAGCAGCCATCAATGCTTTGAAAAGGAATTTCCCTTTGCAAGAAGTGCTGTCTGCAGCTGAAGAAAAACATTCTGGTTGTAAACACCTTCCTCTTCCATCCTTTGCAGTTGAGGAGAGAGACTGGTTAGAGGCTTTTTTGCGTTCCCCTCTACCATGCTCCAGGAGAGAAGCCGGAAATGCTGCTAATGATGTAGTGTGCTCCCCTCTTCCCACCCACCTTATTCCTTGTTTATTGCGGCCGTTGTGCACTCTTCTTGTATCACTTTATCTTGATGAACGTGTATGGTTGCCACCTTCTATATCTAAAGCTGTAAAAATGATTAAGACAGTTATGATATCTGCTCTAGAAAAAAAGAAAATGAGTATTGACCGCTGGTGGTTGTATGTTGATGATTTTCTTCAAGAAACACATATTGCTTTGGAGGCAAAGAGGAAGCTTGCGTGTGCTGGCATTTTATCTGTTAATGGTTCTCCTGATACTCTAGATGATACTGATGATGGCGAGGTGAACTTTGAACCCTCCATGAAGAACAATGTTTGCATGCGTAATGGTTTATTGCCAAACATGTCAATTGCATTGACTAACAAATTGGGATTTCGTATATTGATTTCTGGAAATACCCGATCTGGCCAGAGACATCTTGCTTCTTGCCTTCTTTACTGCTTTGTTGGGAATCTTGAAATACAGAAGATTGATATGGCAACTATTTCACAAGAAGGCCGTGGAGATGTAATGCAAGGGATTGCACAAATACTAATGAGATGTGCTAGCTTGCAATCAAGCATAGTATTCATGCCGAGAATTGACTTGTGGGCTGTGGAGAAACATTTCCAAAATGCTGAGAAGACATATTCCTGCTCAACAAATCATCTATTACCTGGGATGGAAAAGTCTCGTTTCACATCAAACCAAGTTGAGAAAGAAAATAAGTTAAATACTGAGATAAACTCAGCAGAGATGACTAAAAGCCAAACCAACAAAAAGGCTTCACGTGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTATCCACATCCTTGATGATTCTGGCTACTTCAGAAGTTCCCTATTCAGAGCTTCCATGTAAAATAAAGAAATTCTTCCAGACTTATCAATCTAATGGCAGCCAATCAATTCCTTTGGAGCACACAGTTCCTCGATTCTCTCTACAGGTTGGTGGGAATTTCAATCATGACATGATAATCAATCTATCTGCAGCAGAGCTATTGAGAAATTTAGTTGAGCAGCAGGTTCAATTGATTCATAAGAAGTCTCATGCTCATATAGGTATTCATAAGAGCTGCAGAGCCTATGGTTCAATTGGAATTTGTAAAGATAAGGTATGTCAAAGAAAAGATAGTGGGTCAGCTAATGAAAAAAAGAGTGAAACCCACCTTCCTGAGTCATCTGCAAAAGCTCCACCACTACCCAACAGTAGGTCATTGAAGGGAAAATCAACCCTTTTGTTGGCAATATCCACATTTGGCTATCAAATTCTTCTAAACCCACATTTTGCTGAACTCTGTTGGGTCACATCAAAACTCAAAGAAGGTCCTTTTGCTGATGTGAGTGGACCTTGGAGGGGCTGGCCCTTCAATTCCTGTATAGTTCGTCCTAATAATTCACAAGACGAGGTGGCAGTTCCGTATAGCTCTGGTGGCATTAAAAGCAAAGAAAGATCTGGTAATTTAGTCAGAGGTTTGGTTGCTGTTGGTTTATCGGCATACAGAGGTGTTTATAAATCAGTGAGGGAAGTTTCTCTTAACATAAGGAAGGTTCTTGAGATCTTAATCGAACAAATCAATGCAAAAATTCAAGCTGGGAAAGACAGATATCAATATCTTCATATTTTATCGCAAGTGGCTTATTTGGAAGATATGGTCAACAACTGGGCATATGCATTGCTGAGTCTGGAGCCGGGTTCCCCTGAGATTGCGGAAAAGGTTATGTCATCAACTGTTGGGTCTTTAAACAATCATCTCACATGTGAAGATCACCAAGCTGAAGGTGAGGACTGCCATTTGGTTGTTCCTAGGAATGATGATTTGAAGACACTGGAGAGGAGTGATAAGGAAATTCCGGCTGAAACAACTGGCTGTGTTTCCTTGAATGTCAAAAATGGTAATTTAGATGATCTTGATCACGGTGTTCAGAATGCAAGTTCTGAAGGAACTCTACAGAACCATACTCTTCCAGATAAGCAGATAAACAGTTCTGCTGCTTCCAACCAGCCTCTTGATCCATCCTTAAATCAAGAGAATGTGTCATCATTTGGACTATCTGAGTCGGCAACTGTCTGTGAACAAGGTGTTGAGCTCGGTAACTCCAACGCAGATGATGTCAAATTAAATGATGCCTCTTCAAGTGAGGGCAGCGATCATACTGAATCCGGATTAATTTGTGTGTACCAATGTTGCCCTGGCTGTATCTCCAGTCTCTATCATTTGACACAGAAAGTACTTCTTCGCGAGTATCGGTCGAATAATAGCCATTGGACAGTAGAAGATGTACACGACGCTGTTGCATCATTATCTGTGAATCTTATTTCAGCACTTAGAAAATGTTATCTAGCCGAAGATTTCAGTGATTCATCTGACAAAACCTTACGACAAGAAAAGTGTGGAAGAACATGTTATCCATTAAACCAAGGCAAGGATATTGTACCAGTTGAATGTGTTTCTCATTCAACAAGTCAAGGTGCAACTGGAAGCAAAAATGAGTTACTGAATGAATCACTGAAACTTGATTTGAAATTTATTTTCAGAGATGGTGTACTAATGCTTATGGACCCAGATAAAGGTGTTCCCCTTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTGTAAGAGAGTTAATAGAAATGACGAATCACCCTTTTGATTAA 5340 0.4268 MRSSSSLEESNIVRSSRLRKKHKRLDAIYEDEHNRSHGEFNDDVVLRHDAGIRRSSRVRRAPELLDASPPPPKKRRRLGDNGIKGCVEVAKSLERENGSPSGVKESPGTWGSRLRSRVRNVGVEVKEKKESRVRNDGFELKGERKSRRGKRKLFDDAVGSADDEELEVVEIDTEEELEDVEVDGIEKLEGSMPKIVKSKRPGRIKAAKNDSHGSLDESKSEEAEFVLEKDNDEETASIPENELSGGKDILDESAPLTIENATNMSSNLQSEEYGGSIEPSTVECLDKLDDQLGSEKEGQNASDAAEIAGISTKQVRNEGTVHEEANIDENNLKDVCTVRTDELKQASIDKAGLRRIKEGRRCGLCGGGTDGKPPKRLAYDNGESENEAYSGSSASEEPNYDVWDGFGDEPGWLGRLLGPTNDRDGIARIWVHQLCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLSCARANGCIFDHRKFLIACTDHRHFFQPHGTKYLAHMRGRKMKLEMKKRSNDALRKDIGEEERWLENCGDDEEFLKRESKRLHRDLLRIAPVYIGGSDSAPEKPFQGWEAVAGLKDVIRCLKEVVIMPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRHQDQTHSSVVSTLLALMDGLKSRGSVIVIGATNRPDAVDPALRRPGRFDREIYFPLPSVEDRASILSVHTQRWPKPISGSLHEWIARKTLGYAGADLQALCTQAAINALKRNFPLQEVLSAAEEKHSGCKHLPLPSFAVEERDWLEAFLRSPLPCSRREAGNAANDVVCSPLPTHLIPCLLRPLCTLLVSLYLDERVWLPPSISKAVKMIKTVMISALEKKKMSIDRWWLYVDDFLQETHIALEAKRKLACAGILSVNGSPDTLDDTDDGEVNFEPSMKNNVCMRNGLLPNMSIALTNKLGFRILISGNTRSGQRHLASCLLYCFVGNLEIQKIDMATISQEGRGDVMQGIAQILMRCASLQSSIVFMPRIDLWAVEKHFQNAEKTYSCSTNHLLPGMEKSRFTSNQVEKENKLNTEINSAEMTKSQTNKKASRAWMSFIEQVESIGVSTSLMILATSEVPYSELPCKIKKFFQTYQSNGSQSIPLEHTVPRFSLQVGGNFNHDMIINLSAAELLRNLVEQQVQLIHKKSHAHIGIHKSCRAYGSIGICKDKVCQRKDSGSANEKKSETHLPESSAKAPPLPNSRSLKGKSTLLLAISTFGYQILLNPHFAELCWVTSKLKEGPFADVSGPWRGWPFNSCIVRPNNSQDEVAVPYSSGGIKSKERSGNLVRGLVAVGLSAYRGVYKSVREVSLNIRKVLEILIEQINAKIQAGKDRYQYLHILSQVAYLEDMVNNWAYALLSLEPGSPEIAEKVMSSTVGSLNNHLTCEDHQAEGEDCHLVVPRNDDLKTLERSDKEIPAETTGCVSLNVKNGNLDDLDHGVQNASSEGTLQNHTLPDKQINSSAASNQPLDPSLNQENVSSFGLSESATVCEQGVELGNSNADDVKLNDASSSEGSDHTESGLICVYQCCPGCISSLYHLTQKVLLREYRSNNSHWTVEDVHDAVASLSVNLISALRKCYLAEDFSDSSDKTLRQEKCGRTCYPLNQGKDIVPVECVSHSTSQGATGSKNELLNESLKLDLKFIFRDGVLMLMDPDKGVPLHCKFENLCLCSVRELIEMTNHPFD* 1780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0910 1779 MobiDBLite consensus disorder prediction 373 396 - -
Lan5g0910 1779 MobiDBLite consensus disorder prediction 1530 1572 - -
Lan5g0910 1779 Pfam AAA+ lid domain 796 827 IPR041569 -
Lan5g0910 1779 MobiDBLite consensus disorder prediction 293 319 - -
Lan5g0910 1779 Pfam PHD-like zinc-binding domain 432 511 - -
Lan5g0910 1779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 827 IPR027417 -
Lan5g0910 1779 MobiDBLite consensus disorder prediction 1 112 - -
Lan5g0910 1779 MobiDBLite consensus disorder prediction 1272 1297 - -
Lan5g0910 1779 Gene3D - 770 830 - -
Lan5g0910 1779 PANTHER AAA DOMAIN-CONTAINING 49 1774 IPR045199 -
Lan5g0910 1779 MobiDBLite consensus disorder prediction 23 61 - -
Lan5g0910 1779 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 49 1774 - -
Lan5g0910 1779 Gene3D - 595 769 IPR027417 -
Lan5g0910 1779 ProSitePatterns AAA-protein family signature. 739 757 IPR003960 GO:0005524|GO:0016887
Lan5g0910 1779 MobiDBLite consensus disorder prediction 203 236 - -
Lan5g0910 1779 MobiDBLite consensus disorder prediction 1532 1572 - -
Lan5g0910 1779 MobiDBLite consensus disorder prediction 193 249 - -
Lan5g0910 1779 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 408 513 IPR013083 -
Lan5g0910 1779 SMART AAA_5 630 771 IPR003593 -
Lan5g0910 1779 CDD AAA 628 769 - -
Lan5g0910 1779 Pfam ATPase family associated with various cellular activities (AAA) 634 769 IPR003959 GO:0005524|GO:0016887
Lan5g0910 1779 ProSiteProfiles Extended PHD (ePHD) domain profile. 401 511 IPR034732 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0910 Lan-Chr5 22141412 22148857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0910 590 831 Calmodulin-binding Proteins AT3G56690 41.803 2.36e-46 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0910 - - gmx:100803849 2339.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0157 19 1373570 1381212 Lan5g0910 5 22141412 22148857 LSH