Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0900 ATGGCTCAGTTACCTCCAAAAATTCCAACCATACCCCAAAATTCTCCTTCATTTCTTCACCAAAGAGCTTCTTCAATGTCCAACTTCATTCCCTCTTCAACCACTCTTCTTCCTCATCAACAACAACAACAAAATTTGCCATCATGGGTTGATGAATTCCTCGACTTCTCTTCGTCGCGGCGAGGATCTCACCGGAGATCCGCCAGCGACTCAATTGCATTTCTCGAGACCGCGTTCGACGGGTTGGACGAGGATCAGCTGGTTTCTATGTTCTCCGATGACTACGCCACCGTGGGGATGCCGCCGGTACAGACTTCTTCCACGTCCAACCCGTCGTCGCCGTGCTCCGACCAGAATAGTAATAATGATGAGAAGCCAATGGCAATGGCGTTGGACGTTGTGAATCATGGGGTTAAGCATGAAAATGAAACGGTTGAGGAGGAAAGCTCATGTAAGAATGATGCGGCGGCGCAGCCACTCTTTGCCGCCACTACCGGTTGCACTGAAACCGTCTCTGATCCCAAAAGGGTCAAAAGAATTTTGGCTAACCGGCAATCAGCTCAAAGATCAAGAGTGAGAAAGCTACAATACATTTCTGAGCTAGAAAGAAGCGTAACAAGTTTGCAGACTGAGGTATCAGCATTGTCACCAAGAGTTGCATTCTTGGACCACCAACGTTTGATTCTTAATGTTGACAACAGTGCCTTGAAGCAACGGATTGCAGCTTTGGCCCAAGATAAGATTTTCAAAGATGCTCATCAAGAAGCATTAAAGAATGAAATAGAAAGATTGAGACAAATATATGTTCACCAACAGAATCTACAAAAGATGGGTAACTCACTAAACAGCAATGACCATGGTCCTCAATCCCCACAAATGCAACCTCATCATTCTCTTCATCATCATCAACCATTGACATGCATGGACAAAGAACAACCCCTAAGTTGA 948 0.4546 MAQLPPKIPTIPQNSPSFLHQRASSMSNFIPSSTTLLPHQQQQQNLPSWVDEFLDFSSSRRGSHRRSASDSIAFLETAFDGLDEDQLVSMFSDDYATVGMPPVQTSSTSNPSSPCSDQNSNNDEKPMAMALDVVNHGVKHENETVEEESSCKNDAAAQPLFAATTGCTETVSDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKNEIERLRQIYVHQQNLQKMGNSLNSNDHGPQSPQMQPHHSLHHHQPLTCMDKEQPLS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0900 315 Coils Coil 254 274 - -
Lan5g0900 315 PANTHER BASIC LEUCINE ZIPPER 34 1 295 - -
Lan5g0900 315 MobiDBLite consensus disorder prediction 277 315 - -
Lan5g0900 315 MobiDBLite consensus disorder prediction 99 124 - -
Lan5g0900 315 Gene3D - 174 246 - -
Lan5g0900 315 SUPERFAMILY Leucine zipper domain 175 229 IPR046347 GO:0003700|GO:0006355
Lan5g0900 315 MobiDBLite consensus disorder prediction 277 299 - -
Lan5g0900 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Lan5g0900 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 225 IPR004827 GO:0003700|GO:0006355
Lan5g0900 315 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
Lan5g0900 315 PANTHER BASIC LEUCINE ZIPPER 2 1 295 - -
Lan5g0900 315 Pfam bZIP transcription factor 175 219 IPR004827 GO:0003700|GO:0006355
Lan5g0900 315 CDD bZIP_plant_RF2 176 226 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0900 Lan-Chr5 22032221 22035551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0900 1 253 bZIP Transcription Factor Family AT3G58120 53.608 2.62e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan5g0900 bZIP_1 1.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0900 - - gmx:100820197 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0150 19 1323237 1325908 Lan5g0900 5 22032221 22035551 LSH