Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0887 ATGGAATCACCATTCAAGCCAAAAAACCCATTTACACTAGAAACCAAGAACTTGTCATACAAATTGTGCAGCCAACTTGATGAGTACAAAAGTCTTTGTTTTGGTTCAAATCCTATGAGAGGTTCTAAGTACATTTTGAAGGGTATAAATTGTGAGGCAAGGCCAGGAGAACTTACTGCTATTGCTGGACCAAGTGGAGCTGGAAAAACCACACTGCTTGAAATTCTTGCTGGGAGAATATCCCCATGTAAAGTGTCTGGCCATGTGCTGGTCAATCATTTGCCGATGGACGCGAACCGGTTTAGAAGAGCCTCCGGTTATGTCACACAAGAAGATGATTTGTTCCCATCGCTTACGGTTAGAGAGACGCTTATGTATAGTGCTATGCTGAGGCTTCCCGGGGGGCGAAAAGTGGCTGCTACCAGAGTTTCAGAGTTGATGAAGGAGCTTGGGTTGGATCATATCGCAGATTCGAGAATCAGTGGTGGATCAAACCATGGTATATCAGGTGGCGAAAAGCGTAGAGTTTCGATTGGTGTTGATTTAGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCAGCTCTTATGGTAATCTCATTGCTTAGACTAATGGCATTTCATCAAGGTAAGACAATCATTTTAACCATCCACCAACCCGGGTTCAGAATCTTAGAGCTATTTGATGGCCTCATTTTGCTTTCTGATGGATTTGTCATGCATAATGGTTCCTTGAATCTTCTTGAGGCTAGGTTGAAGTTAGCAGGGCATCAAATTCCCCACCATGTCAATGTCCTTGAATTCGCCCTTGACGTCACGAAAAGCTTGGTTATACAAACTTCAGAATCTGAGAACAACCAGTTTCTTCTCATGGACAAAGAGCACCAAGATCACATGATGAGGATGCAGTACTCCAGGGTTTTCAAAGAAAAGGCTCTTATGTACTCAAATTCTCCGATGGACGAGATTTCAATCCTAGGACAAAGATTTTGTTGCAACATATTCAGAACTAAGCAACTTTTTTCAGCCAGAGTCATACAGGCATTAGTAGCTGGATTTGTACTAGGGACCATATTTTTAAATGATGGCAGCAAACAAGATCAAGTAGCATTGCAAACACGAACCGGCTTTTTCGCTTTCAGCCTTACCTTTCTGTTATCATCAACAACAGAAGGACTTCCTATTTTCTTGGAAGAGAGAAGAACTTTTATGACAGAAACCTCAAGAGGAGCTTACAGAGTTTCTTCCTATGTTTTAGCCAATACCCTTGTGTTCCTTCCTTTCCTTCTAATGGTAGCTTTTCTATACACTACTCCAGTTTATTGGCTGGTAGGATTAAGGAAAGACATTGATGGGTTCCTTTACTTCTCCTTAGTGGTTTGGTTGGTCCTCCTCATGTCAAATTCTTTTGTGGCGTGTTTCAGTGCTCTAGTGCCGGATTTCATCCTCGGAACCTCGGTGATTGCGGGGTTAATGGGGTCCTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGATAAAATACCAAGTTACTGGATTTTTATGCACTACTTGAGCCTATTCAAGTATCCATTTGAGTGTCTTATGATAAATGAGTATGGAGGAAATCAAGGGAAAACAAGATGCATAGAAATTAGCAATGGACAATGCATATTGCATGGAGTTGAGTTCTTAAGACAGCAGGGTCTGAAAGAATCACATAAATGGACCAATTTGGCTGTAATGTTGGGGTTCATAGTGGGGTATAGAGTGCTTTGCTTTTTTATTCTTTGGTTCAGATGTTACAGAACTAGAAAATAG 1824 0.4112 MESPFKPKNPFTLETKNLSYKLCSQLDEYKSLCFGSNPMRGSKYILKGINCEARPGELTAIAGPSGAGKTTLLEILAGRISPCKVSGHVLVNHLPMDANRFRRASGYVTQEDDLFPSLTVRETLMYSAMLRLPGGRKVAATRVSELMKELGLDHIADSRISGGSNHGISGGEKRRVSIGVDLVHDPAVILIDEPTSGLDSASALMVISLLRLMAFHQGKTIILTIHQPGFRILELFDGLILLSDGFVMHNGSLNLLEARLKLAGHQIPHHVNVLEFALDVTKSLVIQTSESENNQFLLMDKEHQDHMMRMQYSRVFKEKALMYSNSPMDEISILGQRFCCNIFRTKQLFSARVIQALVAGFVLGTIFLNDGSKQDQVALQTRTGFFAFSLTFLLSSTTEGLPIFLEERRTFMTETSRGAYRVSSYVLANTLVFLPFLLMVAFLYTTPVYWLVGLRKDIDGFLYFSLVVWLVLLMSNSFVACFSALVPDFILGTSVIAGLMGSFFLFSGYFISKDKIPSYWIFMHYLSLFKYPFECLMINEYGGNQGKTRCIEISNGQCILHGVEFLRQQGLKESHKWTNLAVMLGFIVGYRVLCFFILWFRCYRTRK* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0887 607 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524
Lan5g0887 607 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 599 - -
Lan5g0887 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 259 IPR027417 -
Lan5g0887 607 Pfam ABC-2 type transporter 331 541 IPR013525 GO:0016020|GO:0140359
Lan5g0887 607 Gene3D - 13 277 IPR027417 -
Lan5g0887 607 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 269 IPR003439 GO:0005524
Lan5g0887 607 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 7 599 - -
Lan5g0887 607 CDD ABCG_EPDR 12 251 - -
Lan5g0887 607 Pfam ABC transporter 46 196 IPR003439 GO:0005524
Lan5g0887 607 SMART AAA_5 55 246 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0887 Lan-Chr5 21882673 21885100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0887 26 256 Calmodulin-binding Proteins AT2G36910 27.311 1.88e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0887 K05681 - gmx:100807754 1030.39