Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0878 ATGTCCACCACTCACGCTTTCTCCCAATTCCACCACTCATGGTTCAACCGCCTCCACCACATGCTCCAACAACTCTCCTCCACCGCCGCCACCATCCGACCACCCCTCACGCCGGAGCAAAACAACACGCTCCGCAACCTCATTGACAAGGTCATGTCTCACCACCATGATTATTACCGCGCTAAGTCATTCGCCGCCGAGAAGGATCCTCTCGCCGTGTTTGTGTCGCCTTGGGCCACCACCTTAGAACGGTCGCTCCATTGGATCGCAGGGTGGCGTCCTACCACCGCGTTCCACCTGGTGTATACTGAATCGTCGGTTCTGTTTGAGTCGCATATTATTGATATACTTCGTGGGATTCGAACCGGTGACCTTGGTGATCTTTCGCCGGCTCAGTTCCGCCGTGTCAGTGAGTTACAATGTGACACTGTGAAGGAAGAGAATGCAATAACAGAGGAGCTATCAGAGTGGCAGGAGAGTGCGAGCGAAATGATGGGCCCACGAGCTGATATAAACGACAAGATCGGACGGCTGGTAAGCATTATTAAAAAAGCGGATGATCTACGGCTGAGAACGCTGAAGAGCATGATAGAGTTGCTGTCGCCGCAGCAGGCCATTGAATTCTTGATCGCTTCTGCAGAGTTGCTCGTTGGGATCCGTGGATGGGGATTGAATCATGACCGTTAA 687 0.5284 MSTTHAFSQFHHSWFNRLHHMLQQLSSTAATIRPPLTPEQNNTLRNLIDKVMSHHHDYYRAKSFAAEKDPLAVFVSPWATTLERSLHWIAGWRPTTAFHLVYTESSVLFESHIIDILRGIRTGDLGDLSPAQFRRVSELQCDTVKEENAITEELSEWQESASEMMGPRADINDKIGRLVSIIKKADDLRLRTLKSMIELLSPQQAIEFLIASAELLVGIRGWGLNHDR* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0878 228 PANTHER - 3 228 - -
Lan5g0878 228 ProSiteProfiles DOG1 domain profile. 4 228 IPR025422 GO:0006351|GO:0043565
Lan5g0878 228 Pfam Seed dormancy control 30 103 IPR025422 GO:0006351|GO:0043565
Lan5g0878 228 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 3 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0878 Lan-Chr5 21787230 21789344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0878 6 211 bZIP Transcription Factor Family AT5G06950 24.554 1.25e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0878 - - gmx:778192 331.257