Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0866 ATGACGTCAGGGACGAGACAACCAACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGGAGAAGAGCGATAGCGTCGAAGATCTTCTCTGGTTTGAGGATGTACGGGAACTACAAGCTTCCTAAGCATTGTGACAACAATGAAGTTCTCAAAGCTCTTTGTAATGAGGCTGGTTGGACCGTTGAAGCTGACGGCACCACGTATAGGAAGGGATGCAAGCCAGTTGAACAAATGGACATGGTAGGTCGTTCTTCAGTGGCAACCCCATGTTCATCTTACAATCCAAGTCCAGGCTCTTCTTCCTTCCCAAGCCCATGCTCATCCTTCAATGCTGCAAACCCTAACAATGCTGCTGATGGCAATTCCCTAATTCCATGGCTCAAAAACCTCTCATCAGGATCATCATCAGCATCCTCATCCAAGTTTCCACAACTATACATTCACAGTGGCTCCATCAGTGCCCCTGTCACTCCTCCACCGAGCTCTCCAACCGCGGGAACACCGCGACTCAAAGCCGATTGGGAGGATCAATCCAACTCCAATCGTCCTCCCTGGCTCGGGCAGCAGCAATACTCATTCCCACCCTCTTCCACCCCTCCAAGCCCTGGCCGCCAGGTTCTGGACCCGAATTGGTTTGCTGGGATCAGAATTCCTCAGGGTGGACAAGCTTCTCCAACCTTCAGCCTGATGGCTAATTCAAACCCATTTGGGTTCAAGGAAGAGGTTTTTGTAGGAAGTACTAGTGGCTCGCGCATGTGGACACCTGGACAAAGTGGTACATGTTCTCCAGCTGTGGCTGCAAGCTCTGATCACACTGCTGATATTCCAATGACTGAGGCAGTTTCAGATGAATTTGCCTTTGGAAGCAGCACCACTGTAGGTTTAGTGAAGCCCTGGGAAGGAGAGAGAATCCATGAAGAAATCATATCAGATGATCTTGAGCTCACTCTTGGAAACTCAAAGACCAGGTTGCTGCATAAATGA 990 0.497 MTSGTRQPTWKERENNKRRERRRRAIASKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRKGCKPVEQMDMVGRSSVATPCSSYNPSPGSSSFPSPCSSFNAANPNNAADGNSLIPWLKNLSSGSSSASSSKFPQLYIHSGSISAPVTPPPSSPTAGTPRLKADWEDQSNSNRPPWLGQQQYSFPPSSTPPSPGRQVLDPNWFAGIRIPQGGQASPTFSLMANSNPFGFKEEVFVGSTSGSRMWTPGQSGTCSPAVAASSDHTADIPMTEAVSDEFAFGSSTTVGLVKPWEGERIHEEIISDDLELTLGNSKTRLLHK* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0866 329 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lan5g0866 329 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 325 - -
Lan5g0866 329 MobiDBLite consensus disorder prediction 154 208 - -
Lan5g0866 329 MobiDBLite consensus disorder prediction 175 196 - -
Lan5g0866 329 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 133 IPR008540 -
Lan5g0866 329 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0866 Lan-Chr5 21580590 21584668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0866 1 325 BZR Transcription Factor Family AT1G78700 65.982 5.83e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lan5g0866 BES1_N 1.1e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0866 - - lang:109348092 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0117 19 1062928 1066438 Lan5g0866 5 21580590 21584668 LSH
Lan5g0866 5 21580590 21584668 Lan9g0240 9 3169643 3177531 LSH