Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0863 ATGTTACTAATACAACAATTTGGCTATGATAGTGTGCTCAGGGGTCTCAATATAGCTGGAGATATACCCAATGAATTTGGAAGACTCACTCATCTGACAGAACTTGATCTCTCGCGCAATTATTTCAGTGGCTCAATTCCGAAGAGTCTTGGACGCCTCCCCCTTGTCACTCTGGAACTTTTGGGAAATCGACTTAGTGGTCCAATTCCCTCAGAAATTGGTGATATTACTAGTCTTCAGTTCCTGATTTTAGAGGATAATCAACTTGGTGGACCTCTTCCTCCCAGCCTCGGAAATTTGACTGAACTGCTTCTGTTACTTCTTTCTGGAAATAATTTTACAGGGACAATGCCAGAAGAATTAGGCAAACTAACGAATCTCACTGAATTTAGGATAGATGGGAGCAGTTTATCCGGGAAGATACCTAGTTTTATTGGGAATTGGACCCATCTTATGAGATTGGATTTGCAAGGCACATCCATGGAAGGCCCAATTCCTGCCACTATATCTGGCTTGACAAATTTACAAGAATTGAGAATAACTGATTTGAAGGCACCAACAACATTTCCTGATTTGAAGGAATTGAAATTTTTGACTAGACTGGAATTGAGAAATTGCTTAATCACTGGTCCTATTCCTGACTACATTGGCGAACTGTCACAGCTAAAAGTTTTAGACCTGAGCTCCAACAGGTTGTCGGGTAAAATTCCAGATTCACTTCAGGGCTTAAGAATAAATTACTTGTTTCTGACTAACAATTCTCTGACTGGAACAGTTCCTGAATGGTTACAGGAGTCCAAACATAATATTGATTTATCTTACAACAATTTTACCGAGTCTTCTGTAACTAGTTGCCAGCAAGTGGCCGTGAACTTGGTTTCCAGCCACTCTCCCTCAGCAAAAACTTCACTTTCCTGTTTGAAGATGGGCCTACCTTGTTCTGGAAAACCCACTGATAAGTCACTGTTCATAAACTGTGGAGGTCCTGAAATTAAGTTCGAGGGAAATGTATATGAAGCTGACCTTGATCACCGTGGCCCTTCAACTTTTTTTCTTAGCAATACTGGCCAGTGGGCTTATAGCAGCACAGGAGTATTTGTAGGAAATGCTGCTTCTGATTATGTAACAACAAATAAGAAATCTTTGATTATTCAAGGCCCTGCATACTACCAAACAGCCCGAATTGCCCCTCTGTCTCTTAGTTACTTTGGCCTTTGTATGCGAAAGGGCAATTATAAAGTGAGGCTCCATTTTGCTGAGATAATGTTTTCTAGTGACCAGAACCAGACATTTAGCAGCCTTGGAAGGCGCATATTTGATGTTTCGGTTCAAGGTGTTAAATATTTGGAAAATTTTAACATTGCGGAAAAGGCTGGTGGAGCTGGTTTGGGGATCACTGAGGAGTTTAATGTTGATGTAATCAATAGCACCTTGGAAATTCGCTTATCCTGGGCAGGAAAAGGCACTAATGCCATTCCTGAAAGAGGTGTTTATGGACCTCTTATATCTGCTATCAGTGTGACCCCAAACTTCGAAATCCGATCAGGTGGCCTGTCTACTGGAGAAATTGTTGCAATTCTGGGTGCAACATGCGTGTTTATCATATTGGTACTTTTTATCCTTTTGAAAAAGGGTTACATTTGCACGAAAGATCAAATAGACAAAGAACTTCATGATCTTAAAACGGGGTATTTCAGTTTAAAACAAATCAAAATTGCTACTAATAATTTTGACCCAGAAAATAAGATAGGGGAAGGAGGCTTTGGGCCAGTATACAAGGGTATATTTTTAGATGGTACTGTAGTTGCTGTTAAGCAGCTCTCCTCCAGATCAAGGCAAGGAAACCGTGAATTTGTTAATGAAATAGGCATGATATCGGCTTTGCAGCATCCAAATCTTGTGAAGCTTTATGGATGCTGCATTGAAGGAAACGAGTTGCTTCTAGTGTATGAATACTTGGAAAACAATAGTCTTGCTCGTGCACTTTTTGGTAAAGAAGAACATTGGCTACACTTGGAGTGGTCCGCAAGAATGAAGATATGTGTGGGGATAGCAAGGGGACTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTACACAGAGATATTAAGGCAACCAATGTCTTGCTTGATAGGAATCTCAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTGATGAAGACGAGAACACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTACATGGCTCCTGAGTATGCTATGAGGGGTTACTTGACTGATAAAGCAGATGTTTATAGCTTTGGAGTTGTAGCATTAGAGATTGTTAGTGGAAGGAGCAACACAAATTACAGGTCAAAGGAGGAGTTTGTTTATCTTCTGGATTGGGCCTATTTTCTCGAAGAGCAAGGAAACCTTCTGGAGTTGGTGGATCCAGATCTTGGTACAGAGTACTCGGAAGAAGAGGCAATGAGAATGATTCAAATGGCACTCATATGTACAAATCCATCTCCAACTCTTAGACCTCTCATGTCATCTGTAGTGAGCATGCTTGAAGGAGACACTCCAATTCAAGTACCAAAAATCAAAAGGGTTGAGGTTTCACAAGATGGAAGATTCAAATCCTTACAGACGCTAAAACAAGACAACCAAGATCACGCTTCTTCTACACTCTCGTACGATAGTATGGAGCGAAGAAGCCAATCGATGAATGCACCATGGGTTGACTCCTCCACATCTTTACATGCCCAGTAG 2745 0.4077 MLLIQQFGYDSVLRGLNIAGDIPNEFGRLTHLTELDLSRNYFSGSIPKSLGRLPLVTLELLGNRLSGPIPSEIGDITSLQFLILEDNQLGGPLPPSLGNLTELLLLLLSGNNFTGTMPEELGKLTNLTEFRIDGSSLSGKIPSFIGNWTHLMRLDLQGTSMEGPIPATISGLTNLQELRITDLKAPTTFPDLKELKFLTRLELRNCLITGPIPDYIGELSQLKVLDLSSNRLSGKIPDSLQGLRINYLFLTNNSLTGTVPEWLQESKHNIDLSYNNFTESSVTSCQQVAVNLVSSHSPSAKTSLSCLKMGLPCSGKPTDKSLFINCGGPEIKFEGNVYEADLDHRGPSTFFLSNTGQWAYSSTGVFVGNAASDYVTTNKKSLIIQGPAYYQTARIAPLSLSYFGLCMRKGNYKVRLHFAEIMFSSDQNQTFSSLGRRIFDVSVQGVKYLENFNIAEKAGGAGLGITEEFNVDVINSTLEIRLSWAGKGTNAIPERGVYGPLISAISVTPNFEIRSGGLSTGEIVAILGATCVFIILVLFILLKKGYICTKDQIDKELHDLKTGYFSLKQIKIATNNFDPENKIGEGGFGPVYKGIFLDGTVVAVKQLSSRSRQGNREFVNEIGMISALQHPNLVKLYGCCIEGNELLLVYEYLENNSLARALFGKEEHWLHLEWSARMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDRNLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGRSNTNYRSKEEFVYLLDWAYFLEEQGNLLELVDPDLGTEYSEEEAMRMIQMALICTNPSPTLRPLMSSVVSMLEGDTPIQVPKIKRVEVSQDGRFKSLQTLKQDNQDHASSTLSYDSMERRSQSMNAPWVDSSTSLHAQ* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0863 914 Pfam Leucine Rich Repeat 31 52 IPR001611 GO:0005515
Lan5g0863 914 Gene3D Ribonuclease Inhibitor 120 187 IPR032675 -
Lan5g0863 914 ProSiteProfiles Leucine-rich repeat profile. 221 244 IPR001611 GO:0005515
Lan5g0863 914 Pfam Malectin domain 321 505 IPR021720 -
Lan5g0863 914 SMART LRR_typ_2 29 53 IPR003591 -
Lan5g0863 914 SMART LRR_typ_2 100 124 IPR003591 -
Lan5g0863 914 SMART LRR_typ_2 219 242 IPR003591 -
Lan5g0863 914 Pfam Leucine rich repeat 198 255 IPR001611 GO:0005515
Lan5g0863 914 Gene3D Transferase(Phosphotransferase) domain 1 653 863 - -
Lan5g0863 914 Coils Coil 913 914 - -
Lan5g0863 914 Gene3D Phosphorylase Kinase; domain 1 544 652 - -
Lan5g0863 914 Gene3D - 320 510 - -
Lan5g0863 914 PRINTS Leucine-rich repeat signature 32 45 - -
Lan5g0863 914 PRINTS Leucine-rich repeat signature 219 232 - -
Lan5g0863 914 SUPERFAMILY RNI-like 13 281 - -
Lan5g0863 914 ProSiteProfiles Protein kinase domain profile. 577 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0863 914 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 896 - -
Lan5g0863 914 MobiDBLite consensus disorder prediction 873 914 - -
Lan5g0863 914 Gene3D Ribonuclease Inhibitor 188 314 IPR032675 -
Lan5g0863 914 Gene3D Ribonuclease Inhibitor 10 119 IPR032675 -
Lan5g0863 914 SMART serkin_6 577 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0863 914 Pfam Protein tyrosine and serine/threonine kinase 580 795 IPR001245 GO:0004672|GO:0006468
Lan5g0863 914 SUPERFAMILY Protein kinase-like (PK-like) 562 859 IPR011009 -
Lan5g0863 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
Lan5g0863 914 CDD STKc_IRAK 583 850 - -
Lan5g0863 914 PANTHER - 9 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0863 Lan-Chr5 21550944 21560182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0863 13 910 Receptor kinase-like Gene Family AT1G53440 63.855 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan5g0863 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0863 - - adu:107459475 1281.93