Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0862 ATGACCATGAATATGAGAATCACTTCCTCTCAGTTTTTCTTCCTTTCACTACTTCCCATTTGGTTCTCATTCCTTGCTTTTGGGGCCACTACTCTACTACAAGATGAAGTGGAAGCTCTTAAAGATATAGGTAGAACCCTTGGTAAGAAGGATTGGGACTTTAGCATAGATCCATGCAGCTGGGATAGGACACTGGATAATGTGGTCCATTGCAATTGCTCAATCTCCAATGACAACCTCTGCCATGTTGTTAAAATAGTTCTGAAATCACAAAGTCTTCAAGGCATTCTCCCACCAGAACTGATCAGGTTGCCTTACCTCCAACAAATTGACCTTACCAGAAACTACCTTAGTGGTACAATTCCTAGAGAATGGGGCTCCTTGAATCTTCAGAAAATCTCACTTCTTGGAAATAGACTAAGTGGTCCAATCCCAGTAGAGCTGGCAAACATTACCACTCTCAAACGATTGGTTCTCGATTTCAATCAATTCAATGACACACTTCCTCCAGAACTTGGGAATCTTGCCCACATTGAAATGCTGCATCTAAGCTCCAACAACTTTACTGGAGAGTTGCCTATGACTTATGCGACACTGACTTCATTAACCGAATTCCGAATTAGTGACAATCAATTCTCAGGAAGCATACCTGATTTTATTCAAAGATGGACTAATCTTACGATACTAGCAATTCAAGGTAGTGGTTTAAGCGGACCAATTCCTTCTGGAATTTCATTTCTGCAAAATATTACCGATTTGAGAATTAGTGACTTGAGTGGATTTGATTCTACATTTCCACAAGTTGGTAATTTGAAAGGATTGAAGACATTGATATTAAGGAGCTGCAATATTAATGACATACTTCCTCAAAATCTTGTAAACCTGACAAATTTGCAAGTCCTGGACCTCAGTTTTAACAAATTAAGTGGAGAAGTGCCAAGAAACCATGAAGGATTAACGGGAGCAACCTACATATATTTGACAGGAAACTTTCTCACTGGACCAGTGCCTAATTGGACAGTGAACTCTAATAAATACTTAGATCTTTCGTATAACAACTTCAGCATCGAAAACCCAGAGCCAAAGACATGTCGTGCGCAAAATGTGAACATGTTTGCAAGCTTTTCAAGGAACAACTCACCTGTTTCTTGTGAAAGCAGCACTAGAATCTGTACTACAACCGTTAACTCTCTCCATATAAATTGCGGTGGAAAGAAGACTATCATTCGAGGTATAACATATGAAGAAGATACAGATCCAGCTGTACCAGCAGTATATAGACAGAGTAGAGGCAACTGGGCATATAGCAACACTGGCCACTTTTTGGATAATAATACAGCATCTGCACAAGGACAGTTTCTCCCTTATACCTCAGAGAATCAAACTAGGCTTTATATGACTGATATTGAACTGTATAGGAATGCACGCATTTCCCCCATTTCTCTTACTTATTATGGATTCTGCCTGGAAAATGGAGATTACACAGTAAAGCTCCACTTTGCGGAGATAATGTTCACTGATGATAACACATTTAGGAGCCTAGGGAGACGTGTATTTGACGTCTACATTCAGGGAGAGCGGGTACTGAAGGATTTCAACATTGAAGATGAAGCACAAGGAGTTGGCAAGGAAGTTATAAAACAATTTCCGGCTCATGTGACTAGTAATGACTTAGAGATCCGCTTCTATTGGGCTGGCAAGGGGACTACTGCTGTCCCATATAAATCAGTATATGGTCCTCTAATATCAGCTATATCTATCAAGCATGACACTCCACGTAGCATATCAATATGGGTTGTGGTCGCAATTGTTGCTGCAACGGTGATTATTGTCATCCTGGTTTCTGGTATACTTTGGTGGAGAGGTTGTCTTGGAAAGAAACATTCATTAGATACAGAGCTAAGGGATTTAGATCTTCAAACTGGTTTATTTACTTTACGTCAAATCAAAGCTGCAACAAATAACTTTGACATTTGCAATAAGATTGGAGAAGGAGGGTTTGGATCTGTTTATAAGGGCATTATGTCAAATGGCATGGCAATAGCCGTGAAACAGCTTTCGTCCAAATCAGAACAAGGAATACGTGAGTTTGTAAATGAGATTGGTGTGATCTCAGCTTTGCAACACCCTTGTCTTGCTAAACTTTATGGATGTTGTGTTGAGGGAGATCAGTTATTGCTGGTATATGAATATATGGAAAACAATAGCCTTGCACATGCTTTATGGGGCCCAGAAGAATTTCGTCCAAAATTGAGTTGGCCGACAAGGCAGAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTTCCTGCATGAAGAATCGAGACTGAAAATTGTTCATAGGGACATTAAGGCCACTAATGTGTTGCTTGACAAAAATATGAATCCAAAGATATCTGATTTCGGTTTGGCCAAGCTCAATGAGGAGGAAAATAGCCACATAAGTACCAGAATAGCTGGGACCTGCGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTAACCGACAAAGCAGATGTGTATAGTTTTGGAGTTGTTGCCTTCGAAATTGTTAGTGGAAAGAGAAACACTATTCACCGGTCAAAGGAAGAAGAAGTGTTCTATCTTGTTGATTGGGCACTTCTGTTGAAAGAGAAAGGTAACCTCATGGAGCTACTTGATCAAAGATTAGGTTCAGATTTCAATGAAGAGGAGGCAAGAGTAATGATCAAAGTGGCTTTACTGTGCACCAATATGACTTCAAGTCTTAGGCCTACCATGTCTTCTGTGCTAAGCATGCTTGAAGGCGGAACTACGGTTCCGGAATTAGTCTCATATCCAAATAAGGTAATGAATGAGATGGAAGCAATGAGACAGTTTTACAATCTGATTCAAGAAAATGAAAAAAGTGAGACAAGAAGTTTGAGCTTGTCTTTTAATGAGCCATGGACTGCTTCATCTTCATCTGTTGCAGACTTGAATCATTTCCAACTTGATGCTTCCTATTTGGATCAAAAGAAACTCAGAGAGTCAGTATAA 3021 0.3982 MTMNMRITSSQFFFLSLLPIWFSFLAFGATTLLQDEVEALKDIGRTLGKKDWDFSIDPCSWDRTLDNVVHCNCSISNDNLCHVVKIVLKSQSLQGILPPELIRLPYLQQIDLTRNYLSGTIPREWGSLNLQKISLLGNRLSGPIPVELANITTLKRLVLDFNQFNDTLPPELGNLAHIEMLHLSSNNFTGELPMTYATLTSLTEFRISDNQFSGSIPDFIQRWTNLTILAIQGSGLSGPIPSGISFLQNITDLRISDLSGFDSTFPQVGNLKGLKTLILRSCNINDILPQNLVNLTNLQVLDLSFNKLSGEVPRNHEGLTGATYIYLTGNFLTGPVPNWTVNSNKYLDLSYNNFSIENPEPKTCRAQNVNMFASFSRNNSPVSCESSTRICTTTVNSLHINCGGKKTIIRGITYEEDTDPAVPAVYRQSRGNWAYSNTGHFLDNNTASAQGQFLPYTSENQTRLYMTDIELYRNARISPISLTYYGFCLENGDYTVKLHFAEIMFTDDNTFRSLGRRVFDVYIQGERVLKDFNIEDEAQGVGKEVIKQFPAHVTSNDLEIRFYWAGKGTTAVPYKSVYGPLISAISIKHDTPRSISIWVVVAIVAATVIIVILVSGILWWRGCLGKKHSLDTELRDLDLQTGLFTLRQIKAATNNFDICNKIGEGGFGSVYKGIMSNGMAIAVKQLSSKSEQGIREFVNEIGVISALQHPCLAKLYGCCVEGDQLLLVYEYMENNSLAHALWGPEEFRPKLSWPTRQKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKNMNPKISDFGLAKLNEEENSHISTRIAGTCGYMAPEYAMHGYLTDKADVYSFGVVAFEIVSGKRNTIHRSKEEEVFYLVDWALLLKEKGNLMELLDQRLGSDFNEEEARVMIKVALLCTNMTSSLRPTMSSVLSMLEGGTTVPELVSYPNKVMNEMEAMRQFYNLIQENEKSETRSLSLSFNEPWTASSSSVADLNHFQLDASYLDQKKLRESV* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0862 1006 ProSiteProfiles Protein kinase domain profile. 656 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0862 1006 SUPERFAMILY L domain-like 58 360 - -
Lan5g0862 1006 Pfam Leucine rich repeat 273 330 IPR001611 GO:0005515
Lan5g0862 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 287 355 - -
Lan5g0862 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 380 967 - -
Lan5g0862 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 285 - -
Lan5g0862 1006 Gene3D Phosphorylase Kinase; domain 1 625 731 - -
Lan5g0862 1006 Gene3D Ribonuclease Inhibitor 196 247 IPR032675 -
Lan5g0862 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Lan5g0862 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 71 285 - -
Lan5g0862 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 287 355 - -
Lan5g0862 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 380 967 - -
Lan5g0862 1006 CDD STKc_IRAK 662 930 - -
Lan5g0862 1006 Pfam Protein tyrosine and serine/threonine kinase 658 926 IPR001245 GO:0004672|GO:0006468
Lan5g0862 1006 Gene3D - 399 591 - -
Lan5g0862 1006 Gene3D Ribonuclease Inhibitor 248 398 IPR032675 -
Lan5g0862 1006 SMART serkin_6 656 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0862 1006 Gene3D Ribonuclease Inhibitor 32 195 IPR032675 -
Lan5g0862 1006 ProSitePatterns Protein kinases ATP-binding region signature. 662 684 IPR017441 GO:0005524
Lan5g0862 1006 Gene3D Transferase(Phosphotransferase) domain 1 732 938 - -
Lan5g0862 1006 SUPERFAMILY Protein kinase-like (PK-like) 640 951 IPR011009 -
Lan5g0862 1006 Pfam Malectin domain 397 585 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0862 Lan-Chr5 21502844 21514047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0862 29 972 Receptor kinase-like Gene Family AT1G53420 53.403 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan5g0862 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0862 - - gmx:100791136 1382.85