Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0861 ATGAATTTGCCTCAACTTTTCTGCTTTATGCTTCTTGCATGTGCCTTTGCTTCTTTGGCTTTAGGAGCTACTCTATCAGAAGATGAAGTTGAAGTTATGAAGGACATAGGTAAGACACTTGGGAAAAAGGATTGGGACTTTAGTGTTGATCCATGCAGTGGAGAAGGTAACTGGACATCATTTGTTCAAGAGAAAGGGTTCCAAAACGTTGTCTCATGTCATTGTTCTTTTGACACTGGCTCTGTCTGCCATGTTGTTAGCATTAATCTCAAGTCACAAAATCTTTCTGGCACACTCCCAAAGGAACTAGTGAGGTTGCCTTTCCTCCAAGAAATTGATCTAACCCGCAATTACCTTAATGGTACAATTCCTCCACAATGGGGCTCTATGAATCTTGTCAATATTTCACTTCTTGGAAACAGATTAACTGGGTCAATCCCAAAAGAACTGGGAAACATTACCACCTTGAAAAAATTGGTCCTGGAGTTCAATCAATTATCTGGAAATCTTCCTCCAGAGCTTGGGAATCTTCCCCAGCTTGAAATGCTGCTTCTTACCTCCAACAATTTTACTGGAAATTTACCTGCAACATTTGCTGGGCTCACTACATTGAAACACCTACGAATCGGCGACAATCAATTCTCTGGAACTATACCCAATTTTATTCAGAGCTGGACCAATCTTGAGAGGCTGGTGGTGCAAGGGAGTGGTTTGAGTGGACCAATTCCTTCTGAGATTTCATTTCTAAAAAACCTCACTGACTTGAGAATTACTGACTTGAAAGGATCAGATTCTTCTTTTCCACAACTTAGTAACTTGACAAATTTGGAAACACTAGTGCTGAGGAGTTGCAACCTAATAGGAACCATTCCTGAATATCTTGGAAATGTGACTAGCTTAAGATCATTAGATGTCAGTTTTAACAAATTAAGTGGAGATATTCCAAGCACCTTTGGGGACCTAGAGAACATGAATATACTATACTTAACTGGTAATCTTTTCACTGGACCACTTCCCAATTGGATTGATAGACCGGACTACACAGATCTCTCATATAACAACTTCAGCATCGAAGACCCTGGGCAGTTGACATGTCAACAGGGAAGCGTGAACTTGTTTGCATCATCTTTGAAGGCAAACAACTTGGGAACGGTTCCTTGTTTGGGGAACATCAACTGTCCTAAAACTTTGTACTCTCTCCGTATTAACTGTGGTGGAAAGCCGGTAAATACTAACGGAAGCATGATTTATGATGATGATTCACTTGAAGCTGGACCAGCAAGATTTCACCGGACTGGATCAAATTGGGCATTTAGCAACACCGGTCACTTCTTTGATAGTGGCCTTGTAGACTACTATACCTGGCCTAACACAACTAAGCTTGCTATGGACAATGCTGAATTGTACATGGATGCACGTGTTTCTCCTCTTTCGCTCACTTATTATGGATTTTGCCTGGGAAATGGAAGCTACACAGTAAATCTCCATTTTGCTGAGATAATGTTCACTGATGATCAATCATATAAGAGCCTTGGGAGGCGTGTATTTGACATCTATATTCAGAAAAAGTTGGTGCTAAAGGATTTCAATATTGCAAAAGAAGCGGGAGGAGTTGGTAAGGCAATTATAAAAAAATTCACTGCTATCGTGACTAGCAATACCTTGGAGATTCGCTTACATTGGGCTGGAAAAGGAACCACTGCTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTTGATCCTGACTTTCCACCCCCTATGGAAAATGGAAGCAGCGTAACTGTGCGGTCTATTGTTGCAATTGTAGTTGCTGGAGCCCTTTTTATCATCATGTTATTTGGTATACTTTGGTGGAGAGGATGTCTAGGACAGAAAAGTTCGTTGGAAAGAGAGCTAAAAGGTTTAAATTTGCAAAATGGCTTTTTTCCTTTACGGCACATCAAAGCAGCAACTAACAACTTTGATCCTGCCTTTAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGAGTTCTTTCAGATGGCACTGCAGTAGCAGTTAAGCAGCTTTCTTCTAAATCGAAGCAAGGGAATCGTGAGTTTATAAATGAGATTGGCATGATTTCTGCTTTGCAGCACCCTTCTCTAGTTAAGCTCTATGGATTTTGCATGGAGGGAGATCAATTGTTGCTAATATATGAATACATGGAAAACAATAGCCTTGCCCATGCTTTGTTTGCTCAAGAAAAAAGTCAATTGAAATTGGATTGGTCAACAAGGCAGAAGATTTGCATTGGTATTGCTAGAGGTTTGGCTTACCTCCATGGAGAGTCGAGGCTTAAGATAGTTCATCGGGACATCAAGGCCACTAATGTGTTGCTCGATAAAGATCTAAGTCCGAAGATATCGGATTTTGGTTTGGCCAAGCTCAATGAAGAGGGCCATACCCACATGACCACCCGAGTAGCTGGCACTTATGGATATATGGCTCCCGAGTATGCGATGCATGGTTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCTTTGGAAATTGTTAGTGGGAAGAGCAATACCAAGAGCTGGCCAAAGGAAGAATGCTTCTCTCTTGTTGATTGGGTGCTTCTATTGAAAGAAAAAGGTGATCTAATGGACCTAGTTGATGAAAGATTAGGTGTAGACTTCAAAAAAGAGGAAGTAATGGTCATGATCAATGTGGCTCTTTTATGCACACATTCTTCTCCAATGCACAGACCTGCAATGTCTTCAGTGGTAAGCATGCTTGAAGGAAGAACTGATGTTCAAGAAGTGGTGCCAGACACCGAGGTATTCGACGACAAGAAGTTGGAGGCGATGCGGCAGTATTATCAGCATAGGGAAAAAAGTAAGACATGGCAGACTCAAGAAGAGAGCATTTCAATAGATGAAAATTTTGCAGCTATGTCTGATACAGATCTCATTTTTGTTAACCAAGATGATTATTCTTCATCCTATGAGGAAAATACTATCACTATGTAA 3024 0.4074 MNLPQLFCFMLLACAFASLALGATLSEDEVEVMKDIGKTLGKKDWDFSVDPCSGEGNWTSFVQEKGFQNVVSCHCSFDTGSVCHVVSINLKSQNLSGTLPKELVRLPFLQEIDLTRNYLNGTIPPQWGSMNLVNISLLGNRLTGSIPKELGNITTLKKLVLEFNQLSGNLPPELGNLPQLEMLLLTSNNFTGNLPATFAGLTTLKHLRIGDNQFSGTIPNFIQSWTNLERLVVQGSGLSGPIPSEISFLKNLTDLRITDLKGSDSSFPQLSNLTNLETLVLRSCNLIGTIPEYLGNVTSLRSLDVSFNKLSGDIPSTFGDLENMNILYLTGNLFTGPLPNWIDRPDYTDLSYNNFSIEDPGQLTCQQGSVNLFASSLKANNLGTVPCLGNINCPKTLYSLRINCGGKPVNTNGSMIYDDDSLEAGPARFHRTGSNWAFSNTGHFFDSGLVDYYTWPNTTKLAMDNAELYMDARVSPLSLTYYGFCLGNGSYTVNLHFAEIMFTDDQSYKSLGRRVFDIYIQKKLVLKDFNIAKEAGGVGKAIIKKFTAIVTSNTLEIRLHWAGKGTTAIPFGSVYGPLISAISVDPDFPPPMENGSSVTVRSIVAIVVAGALFIIMLFGILWWRGCLGQKSSLERELKGLNLQNGFFPLRHIKAATNNFDPAFKIGEGGFGPVYKGVLSDGTAVAVKQLSSKSKQGNREFINEIGMISALQHPSLVKLYGFCMEGDQLLLIYEYMENNSLAHALFAQEKSQLKLDWSTRQKICIGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLSPKISDFGLAKLNEEGHTHMTTRVAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTKSWPKEECFSLVDWVLLLKEKGDLMDLVDERLGVDFKKEEVMVMINVALLCTHSSPMHRPAMSSVVSMLEGRTDVQEVVPDTEVFDDKKLEAMRQYYQHREKSKTWQTQEESISIDENFAAMSDTDLIFVNQDDYSSSYEENTITM* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0861 1007 Gene3D Ribonuclease Inhibitor 41 190 IPR032675 -
Lan5g0861 1007 SUPERFAMILY Protein kinase-like (PK-like) 644 931 IPR011009 -
Lan5g0861 1007 CDD STKc_IRAK 665 932 - -
Lan5g0861 1007 Pfam Malectin domain 399 582 IPR021720 -
Lan5g0861 1007 Gene3D - 400 586 - -
Lan5g0861 1007 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
Lan5g0861 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Lan5g0861 1007 ProSiteProfiles Protein kinase domain profile. 659 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0861 1007 Pfam Protein tyrosine and serine/threonine kinase 664 930 IPR001245 GO:0004672|GO:0006468
Lan5g0861 1007 SUPERFAMILY L domain-like 79 355 - -
Lan5g0861 1007 Gene3D Transferase(Phosphotransferase) domain 1 735 945 - -
Lan5g0861 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 377 974 - -
Lan5g0861 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 286 342 - -
Lan5g0861 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 287 - -
Lan5g0861 1007 SMART serkin_6 659 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0861 1007 Gene3D Phosphorylase Kinase; domain 1 628 734 - -
Lan5g0861 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 377 974 - -
Lan5g0861 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 72 287 - -
Lan5g0861 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 286 342 - -
Lan5g0861 1007 Gene3D Ribonuclease Inhibitor 191 399 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0861 Lan-Chr5 21485659 21497337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0861 19 959 Receptor kinase-like Gene Family AT1G53420 56.034 0.0 1026
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan5g0861 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0861 - - gmx:100786496 1592.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0861 5 21485659 21497337 Lan9g0239 9 3124406 3146418 LSH