Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0849 ATGATGAGGAAGTTTCTGGTTATAGCATTTTCCATAACCATATGCTTCATAGCTTTTGTGTTATCAAAGATTATTATCTCAGTTCTACTCTACAAAAGATGGAAAAAAAAGCATATGATTTATGAAGAAGAAGGAAAAATGGTAATATTCAAGACTTCAGTGTTGCAATCTCTAACATCTGAAGTAGTCTTAAAGAAGACACAGAAACTGAGCAACAAAGACATAATTGGTTCTGGTGGTTATGGTATAGTTTATGAACTAAAACTAGATGAGTCCATAGCCTTTGCTGTGAAAAGGTTGAACAGAGGAACTGCAGAGAGAGATAAAGGTTTTGAGAGAGAGTTAGAAGCAATGGCAGACATAAAACACAGGAATATTGTGACCCTTCATGGATATTATACTGCACCACATTACAATCTTCTCATATATGAGCTAATGCCTAATGGAAGTTTGGATTCTTTTTTGCATGGAAGATCAAGAGAAAAGAAGGTTTTGGATTGGCCAACAAGATACAGAATAGCTGTAGGTGCTGCTAGAGGAATAGCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGATATCAAATCAAGTAATATATTGTTGGATGAAAATATGGAGGCTAGAGTTTCTGATTTTGGGTTAGCCACACTGATGGAACCAAATAAAACTCATGTTTCAACAATTGTGGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGGAGAGCAACATTCAAAGGGGATGTTTATAGTTTTGGAGTTGTGTTACTAGAGCTTTTAACAGGGAAAAAACCTAGTGATGAAGCATTTATGGAAGAAGGAACCAAGCTTGTAACATGGGTGAAGGCTGTGGTTGGAGAAAAGAAGGAAGAGTTAGTTCTGGACAATAGCTTAGGGTGTTGTCCAATGCAAGAGATCAACAAGGTGTTCAACATTGCAATGATGTGCCTTGAACCAGATCCCTTGAATAGGCCAACCATGGCAGAGATTGTCAACATGCTAGGCCAAACAGAACCACAGAAACTTGTCAAAGCATCCTGA 1059 0.3777 MMRKFLVIAFSITICFIAFVLSKIIISVLLYKRWKKKHMIYEEEGKMVIFKTSVLQSLTSEVVLKKTQKLSNKDIIGSGGYGIVYELKLDESIAFAVKRLNRGTAERDKGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDSFLHGRSREKKVLDWPTRYRIAVGAARGIAYLHHDCIPHIIHRDIKSSNILLDENMEARVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATFKGDVYSFGVVLLELLTGKKPSDEAFMEEGTKLVTWVKAVVGEKKEELVLDNSLGCCPMQEINKVFNIAMMCLEPDPLNRPTMAEIVNMLGQTEPQKLVKAS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0849 352 Gene3D Phosphorylase Kinase; domain 1 31 145 - -
Lan5g0849 352 Pfam Protein kinase domain 72 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0849 352 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Lan5g0849 352 SMART serkin_6 70 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0849 352 SUPERFAMILY Protein kinase-like (PK-like) 53 340 IPR011009 -
Lan5g0849 352 ProSiteProfiles Protein kinase domain profile. 70 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0849 352 Gene3D Transferase(Phosphotransferase) domain 1 146 351 - -
Lan5g0849 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Lan5g0849 352 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 345 - -
Lan5g0849 352 PANTHER BNAA07G39120D PROTEIN 3 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0849 Lan-Chr5 21351244 21354335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0849 4 340 Receptor kinase-like Gene Family AT2G35620 45.294 8.35e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lan5g0849 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0849 - - ahf:112703495 611.683