Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0827 ATGGCAAATATGAGCATCAACTTGGTGCTTTATCATGGGTCATTGTTGCCCCATGAACTTGTTCCTTCTCAGCTGAGACTTTCAAGAACAAGAGTATTAGCAACCAATAGAGCCCTTCAAGTTTGCACAGAAAGGTGGAGCTGCAGTGCTTCTTCTTTTTGTTGTTATTGCTTCCATTTCAAGGGATGCAGCTGCAGGTGGAAACGGCTTGTTAGAAGCTGTTTCACCACTGAGTCTGTTATTGCTAGTGATGAAAATTATGGCAATAAGCAGGTTGTTAGTCTCACGCCGCGCCTATACGACTATATCCTCAAAAATGTTCGAGAACCAAAGATTTTAAGACAATTGCGAGAGGAAACGGCCTCTATGCGTGGAAGTCAGATGCAGGTGTCTCCTGAACAGGCACAACTGCTTGCAATGCTTGTGCAGACTCTTGGAGCAGAACGGTGTATTGAAGGTTACTCATCACTGGCCATAGCATTAGTCCTGCCAGAATCAGGTTATTTAGCCGCCTGTGAAAGAGATGCCGAATCTCTTGAAGTTGCTAAGAAGTATTATCACCTAGCTGGTGTTTCACATAAGGTGGATGTAAAACAAGGACTTGCAGCAGAATCCCTAGAGTTTTTAATTATGAATGGTGAAGCAGGCAGCTATGACTTTGCATTTATTGATGCTGATAAAAGAATGACTCCGAAATATTTCGAACTGCTACTACAACTGGTTAGGGTTGGAGGTCTTATTGTGATTGATAATGTTCTTTGGCATGGAAAAGTTGCCGATCCACTGGTAAATGACTCTAAGACTATCAGCATTAGAAATTTTAACCAACAGTTAATGGAAGACAAGCGTGTAAGCATCAGTATGGTTCCTATCGGAGATGGGATAACAATCTGTCGAAAAAATCGACTCATTTTCTGA 918 0.4194 MANMSINLVLYHGSLLPHELVPSQLRLSRTRVLATNRALQVCTERWSCSASSFCCYCFHFKGCSCRWKRLVRSCFTTESVIASDENYGNKQVVSLTPRLYDYILKNVREPKILRQLREETASMRGSQMQVSPEQAQLLAMLVQTLGAERCIEGYSSLAIALVLPESGYLAACERDAESLEVAKKYYHLAGVSHKVDVKQGLAAESLEFLIMNGEAGSYDFAFIDADKRMTPKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVNDSKTISIRNFNQQLMEDKRVSISMVPIGDGITICRKNRLIF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0827 305 Gene3D Vaccinia Virus protein VP39 80 301 IPR029063 -
Lan5g0827 305 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 89 301 IPR002935 GO:0008171
Lan5g0827 305 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 103 300 IPR029063 -
Lan5g0827 305 PANTHER O-METHYLTRANSFERASE-RELATED 78 301 - -
Lan5g0827 305 Pfam O-methyltransferase 107 300 IPR002935 GO:0008171
Lan5g0827 305 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 78 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0827 Lan-Chr5 20923973 20928293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0827 68 289 Monolignol Biosynthesis Gene Families AT3G62000 75.652 1.91e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0827 - - gmx:100776619 447.973