Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0820 ATGGCATTGGAATGTAGTTTCAACATGATGATGCTATTGTTTTGCTTTGGTATTATCATTGTAAGTTCAATCAATGAAGAGGGTTCAAGTCTTTTGAAGTTCAAGAGTTCAATCATTGACCCTCAAAACAATCTTCATGATTGGAATTCTTCTGATTCCACTCCTTGTAATTGGAATGGTGTGCATTGCAAGGGTTCAGTGGTAACTTCTGTGAAACTCTATCACCTTAATCTCTCTGGTATTTTATCTCCTAGCATATGTCACCTTCCATGGCTACTTGAGTTGAACCTGTCGAAAAATTTCATTTCCGGCCCTATTCCTGAAGGTTTTGTTGATTGCAATAGATTAGAAATTTTAGACCTTTGTACAAATAGGCTTCATGGTCCTCTTCTTTTGACCCCTATTTGGAAAATCAAACCACTTAGAAAGCTTTACCTTTGTGAGAATTATATGTATGGTGAAGTATCAGAAGAGCTTGGGAATTTGGTGTCACTTGAGGAGCTAGTTATTTATAGCAATAACATAACCGGGAAAATTCCGAAATCTATCAGTAAGTTGAAGCACCTTAGAGTTATTAGAGCAGGCCTGAATGGGCTATCAGGGTCAATACCTTCAGAAATTAGTGAGTGTGAGAGCTTGGAGATATTGGGTTTGGCACAGAATAAGTTGGAAGGTTCTATTCCGAGGGAGCTTCAAAAGCTTCAGAACCTTACTAACTTGATTCTGTGGCAAAACTCTTTATCAGGTGAGATTCCTCCCGAAATCGGGAATATTGGTAGCCTGGAGTTGCTGGCTTTGCATCAAAATTCATTTAGTGGTGATGTCCCCGTAGATCTTGGGAAACTGTTGCGGTTGAAGAGGTTGTACATATACACCAACCAGCTGAATGGGACAATTCCACCAGAGCTAGGGAACTGCACAAATGCTATTGAGATAGATCTATCGGAGAATCGTTTGATCGGGATCATTCCCAAAGAGCTTGGTCAGATATCTAATCTTAGCTTGCTTCATCTATTTGAAAACCATCTGCACGGATGTATTCCTAAGGAGCTTGGCCAGTTAAAGCTGCTCAAATATTTAGACCTTTCGATGAATAACTTAACAGGTACAATCCCACTGGAATTTCAAAATCTTACATATATTGAGGATTTGCAGCTGTTTGATAATCATCTTGGGGGCATGATTCCTCCTTATCTTGGAGCTACTCGAAACCTTACAATTCTCGATATATCGGCGAATAATCTTGTCGGTACTATACCCGTCCATCTTTGTGAATATCAGAGGCTGCAATTCTTGAGCCTTGGCTCAAATAGGTTGTTTGGAAATATTCCTTATAGCCTGAAAACTTGCAAGTCTCTTGTGCAGTTAATGCTAGGGGGTAACCAGTTGACAGGAAGCCTACCAGTTGAAATGTATGAACTTCACAATCTTACGGCGCTTGAACTTTATCAGAACCGGTTCTCTGGGATAATAAACCCGGGTATAGGTCAACTTAAAAATTTGGAGAGGCTTCTCTTGTCAGATAATTATTTTGTTGGCTATCTGCCTTCTGAGATTGGAAATTTATCGCAGCTTGTCTCGTTCAATGTTTCCTCTAATCGCCTCACAGGAAGTATTCCTGGTGAGCTAGGAAATTGTGCAAGACTACAAAGGCTTGATCTCAGCAGGAACCGGTTCAGTGGTGGGCTTCCTAACGAAATTGGCAATCTGGTGAATTTGGAGCTGTTGAAAATTTCTGATAATGCACTCTATGGAGAAATACCAGGCACTTTAGGGAATCTTAATCGTCTCACAGCGCTCGAGCTAGGTGGCAACCAGTTTTCGGGAAGCATTCCTTATCGTCTGGGAAGACTTGCAGCCCTTCAAATTGACCTTAACCTGAGCCACAACAATCTTTCTGGCACAATTCCTGACAGCCTAGGGAACTTGCAAATGCTTGAGTCGCTTTATTTAAATGACAATCAACTTGTTGGTGAAATTCCTGATTCAATCGGTAACCTTCCTAGTCTTATAGTTTGCAATGTATCTGACAATAAGCTGGTAGGGTCTGTTCCAGACACCCCTGCATTTAGAAAGATGGATTTGACAAACTTTGTTGGGAACAGCGGGTTGTGCCGAGTAGGTTCTGATCATTGTCATCGACCTGTACCTTCATCTCATGCAGCAAAACCAAGCTGGTTCAGAGATGGTTCATCAAGGGAAAAGATCGTAACCGTTGTTTGTGGCGTAGTTGGATTAGTTTCTCTTATTTTCATAGTCTGTATATGTTCGGCCATGAGGCGCCGCAGTCCTACTTTTGTTTCAGTTGAAGGGCAAATGAAGCCTCAAGTCTTAGATAACTATTACTTTCCTAAAGAAGGCTTTAAATACCAGGATCTCTTGGAAGCCACTGGCAACTTTTCGGAAACTGCTGTTTTAGGAAGTGGAGCTTGTGGCACTGTCTACAAGGCTATTATGAATGATGGTGAGGTGATTGCTGTCAAAAAGTTGAAATCACATGGAGAAGGAGCAAATGTAGACCGAAGCTTCCTTGCCGAGATTTCAACCCTTGGAAAGATCAGGCACAGGAACATTGTGAAACTGTATGGATTTTGTTACCATGAGGATTCTAATCTTCTCTTATATGAATACATGGAAAATGGAAGCCTCGGTGAACAACTTCATTCAAAAACATCTAACTGCATGTTGGATTGGAGCGATCGATACAAAATTGCTCTTGGAGCAGCAGAAGGCTTATGCTATCTTCATTATGATTGCAAGCCTCAAATCATTCACCGTGATATTAAATCGAGCAACATATTACTTGATGAAGTGTTTCAGGCTCATGTCGGAGACTTTGGCTTGGCAAAGTTGATTGACTTTTCATACTCAAAATCCATGTCTGCTGTGGCAGGATCATATGGCTACATAGCCCCAGAATATGCTTATACAATGAAGGTAACTGAGAAATGTGACATCTATAGCTTCGGGGTAGTTTTGCTGGAACTGGTTACTGGGAAGTCACCTGTTCAACCTTTGGAACAAGGTGGCGATCTAGTGACTTGGGTGAGACGAGCAATTCAAGCAGCAGTACCGACTTCTGAACTACTCGACAAGCGATTGCATCTGAGTGCGCAAAAAACAGTGGAAGAGATGTCTCTTATTCTCAAAATCGCTCTATTTTGCACCAGTACATCTCCAATTAAGAGGCCTACAATGAGAGAGGTCGTCGCGATGTTGATTGATGCTAGAGAATATGTTAATAATTCGCCAGCCTCTCCTACTTCAGAATCTCCACTGGATGAAGGTGTATCTTCCAAAGATAATCTTTGA 3312 0.413 MALECSFNMMMLLFCFGIIIVSSINEEGSSLLKFKSSIIDPQNNLHDWNSSDSTPCNWNGVHCKGSVVTSVKLYHLNLSGILSPSICHLPWLLELNLSKNFISGPIPEGFVDCNRLEILDLCTNRLHGPLLLTPIWKIKPLRKLYLCENYMYGEVSEELGNLVSLEELVIYSNNITGKIPKSISKLKHLRVIRAGLNGLSGSIPSEISECESLEILGLAQNKLEGSIPRELQKLQNLTNLILWQNSLSGEIPPEIGNIGSLELLALHQNSFSGDVPVDLGKLLRLKRLYIYTNQLNGTIPPELGNCTNAIEIDLSENRLIGIIPKELGQISNLSLLHLFENHLHGCIPKELGQLKLLKYLDLSMNNLTGTIPLEFQNLTYIEDLQLFDNHLGGMIPPYLGATRNLTILDISANNLVGTIPVHLCEYQRLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGGNQLTGSLPVEMYELHNLTALELYQNRFSGIINPGIGQLKNLERLLLSDNYFVGYLPSEIGNLSQLVSFNVSSNRLTGSIPGELGNCARLQRLDLSRNRFSGGLPNEIGNLVNLELLKISDNALYGEIPGTLGNLNRLTALELGGNQFSGSIPYRLGRLAALQIDLNLSHNNLSGTIPDSLGNLQMLESLYLNDNQLVGEIPDSIGNLPSLIVCNVSDNKLVGSVPDTPAFRKMDLTNFVGNSGLCRVGSDHCHRPVPSSHAAKPSWFRDGSSREKIVTVVCGVVGLVSLIFIVCICSAMRRRSPTFVSVEGQMKPQVLDNYYFPKEGFKYQDLLEATGNFSETAVLGSGACGTVYKAIMNDGEVIAVKKLKSHGEGANVDRSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSKTSNCMLDWSDRYKIALGAAEGLCYLHYDCKPQIIHRDIKSSNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGKSPVQPLEQGGDLVTWVRRAIQAAVPTSELLDKRLHLSAQKTVEEMSLILKIALFCTSTSPIKRPTMREVVAMLIDAREYVNNSPASPTSESPLDEGVSSKDNL* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0820 1103 Gene3D Ribonuclease Inhibitor 22 173 IPR032675 -
Lan5g0820 1103 SUPERFAMILY Protein kinase-like (PK-like) 775 1073 IPR011009 -
Lan5g0820 1103 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lan5g0820 1103 ProSiteProfiles Protein kinase domain profile. 800 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0820 1103 Pfam Leucine Rich Repeat 357 378 IPR001611 GO:0005515
Lan5g0820 1103 Pfam Leucine Rich Repeat 646 667 IPR001611 GO:0005515
Lan5g0820 1103 SUPERFAMILY L domain-like 48 276 - -
Lan5g0820 1103 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 1084 - -
Lan5g0820 1103 Gene3D Phosphorylase Kinase; domain 1 767 877 - -
Lan5g0820 1103 SMART serkin_6 800 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0820 1103 MobiDBLite consensus disorder prediction 1081 1103 - -
Lan5g0820 1103 Gene3D Transferase(Phosphotransferase) domain 1 878 1090 - -
Lan5g0820 1103 SMART LRR_typ_2 474 498 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 234 258 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 354 377 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 162 186 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 522 546 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 570 593 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 594 618 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 643 667 IPR003591 -
Lan5g0820 1103 SMART LRR_typ_2 282 306 IPR003591 -
Lan5g0820 1103 SUPERFAMILY L domain-like 564 707 - -
Lan5g0820 1103 Gene3D Ribonuclease Inhibitor 371 471 IPR032675 -
Lan5g0820 1103 Gene3D Ribonuclease Inhibitor 275 370 IPR032675 -
Lan5g0820 1103 Pfam Leucine rich repeat 500 559 IPR001611 GO:0005515
Lan5g0820 1103 Pfam Protein kinase domain 801 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0820 1103 Gene3D Ribonuclease Inhibitor 174 274 IPR032675 -
Lan5g0820 1103 Gene3D Ribonuclease Inhibitor 472 587 IPR032675 -
Lan5g0820 1103 Gene3D Ribonuclease Inhibitor 588 712 IPR032675 -
Lan5g0820 1103 PANTHER OS07G0152200 PROTEIN 10 1084 - -
Lan5g0820 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Lan5g0820 1103 SUPERFAMILY L domain-like 197 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0820 Lan-Chr5 20844033 20849280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0820 18 1077 Receptor kinase-like Gene Family AT1G73080 37.199 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan5g0820 Pkinase 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0820 - - gmx:100818311 1794.63