Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0819 ATGGACGAAAGCACTTTCTTCTTCCCACCAGACTCAGACCTTGATCTCAGTTTCACCAGCACCACCACCGACCGCACCTTCACCTCTTCCAGTGCACGCACCAGTTTAGCCCGTAGTAGTTTAACTCTCAGCTTCAACGACCGTCTCTCCACCACCTCTGCCACCGCCACAAATGACTCCTCCACCTCCGTCATATGCCGTCCCCACCGCAGCTCCGATCCTCATTGGTCTGCAATCAAGGCTGCAACCACTCTTTCCTCTGACGGCCGCCTCCACCTCCGTCACCTCAAACTCATCCGCCACCTTGGTACCGGCAACCTCGGCCGCGTCTTCCTCTGTCGCCTCCGTGACTATGACGGCGCTAACTTCGCTCTCAAGGTTGTCGACAAGGACCTCCTCAGCGCCAAGAAACTCTCCCACGTTGAAACCGAAGCCGAGATACTCCACGCGCTTGATCACCCGTTTCTCCCCACGCTCTACGCGCGCATCGATGTTTCACATTACACGTGTCTCCTTATAGACTACTGCCCTGGCGGTGACCTCCACTCTCTCCTATGTAAGCAGCCTGGTAATCGACTCCCAATCCAGGCTGCTCGATTCTTCGCGGCAGAGGTACTCGTTGCATTGGAGTACCTCCACGCGCTTGGTATTGTTTATCGTGACCTTAAACCTGAAAACATTTTGTTACGTGAGGATGGCCACGTCATGCTTTCGGATTTCGATTTGTGTTTTAAAGCTGACGTGGATCCAAAATTTGAATACCGGGCCCACTCTGGTAAATCCAAAACAAAAGTTAGTTGTTTCAATTACGAAACTAAATCTTCAAAAGAGAAGGTTGTAGCCGAGTTTGTAGCCGAACCAATTACAGCATTTTCACGGTCATGTGTTGGGACACACGAATATTTGGCACCAGAGCTTGTAAATGGTTACGGTCACGGTAACGGTGTTGATTGGTGGGCTTTTGGGGTGTTTATTTATGAGATGTTATATGGAACGACACCGTTTAAAGGGTGTAATAAAGAGAGCACACTGCGCAATATAGCATCAAGTAAAGAAATGAGGTTCCACGTGGCAGATAGAGAGGAGATAGGCATGGTAGAGGCAAGAGATTTGATAGAGAAACTTTTGGTTAAGGACCCAATAAAGAGATTAGGGTGTTGTAGGGGTGCCACTGATATTAAGGGACACCCATTTTTTAATGGGATCAAGTGGCCCTTAATTAGGACCTATAAGCCACCAGAAGTGAGGGGATTATTGAGGAAGAAGAGTAGGTCAAATATTAGTAATGTGACCCTAAAGAAGAGGAGATGGTGGTGGAAGGGGCTTGAGTATATCATGAGGAACAAGGGTGTACAATCTAATTTTTTGTCAAGCTATAGTAATCATAATTATTATCAATATGTTAATAGTAGTAAGGTTAGGTGA 1425 0.4751 MDESTFFFPPDSDLDLSFTSTTTDRTFTSSSARTSLARSSLTLSFNDRLSTTSATATNDSSTSVICRPHRSSDPHWSAIKAATTLSSDGRLHLRHLKLIRHLGTGNLGRVFLCRLRDYDGANFALKVVDKDLLSAKKLSHVETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHSLLCKQPGNRLPIQAARFFAAEVLVALEYLHALGIVYRDLKPENILLREDGHVMLSDFDLCFKADVDPKFEYRAHSGKSKTKVSCFNYETKSSKEKVVAEFVAEPITAFSRSCVGTHEYLAPELVNGYGHGNGVDWWAFGVFIYEMLYGTTPFKGCNKESTLRNIASSKEMRFHVADREEIGMVEARDLIEKLLVKDPIKRLGCCRGATDIKGHPFFNGIKWPLIRTYKPPEVRGLLRKKSRSNISNVTLKKRRWWWKGLEYIMRNKGVQSNFLSSYSNHNYYQYVNSSKVR* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0819 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lan5g0819 474 Gene3D Transferase(Phosphotransferase) domain 1 180 417 - -
Lan5g0819 474 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG2 7 432 - -
Lan5g0819 474 CDD STKc_phototropin_like 94 415 - -
Lan5g0819 474 ProSiteProfiles Protein kinase domain profile. 96 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0819 474 Gene3D Phosphorylase Kinase; domain 1 95 427 - -
Lan5g0819 474 SMART serkin_6 96 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0819 474 Pfam Protein kinase domain 98 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0819 474 PANTHER FLIPPASE KINASE 1-RELATED 7 432 - -
Lan5g0819 474 SUPERFAMILY Protein kinase-like (PK-like) 73 414 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0819 Lan-Chr5 20836634 20838084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0819 1 471 AGC Kinase Gene Family AT3G14370 66.940 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan5g0819 Pkinase 6.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0819 - K08286 lja:Lj0g3v0200189.1 688.337