Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0816 ATGCTTATATTAGTGGGAAACGTGCAAGGAACAATGGGTTCTCTAGCTTCACCTGTGAGTTTGGGGAATCTAATGAGTGTGAGTTCTTCTAGAATGTCACATTCTAGTGTGAGGAGAGTGTCTTTCTCTATAGGGAATTGTAAGGGTAAGAAGAATTGGCATTGCGTGTCTTTATCTGTGTGTAGATATTCAGTTATCACAACTGATTTTGTTGCTGATCAAGGAAATTCAGTGTCTCTTGATTCTAACAGTAGTAGAGAAAGTAGTAGTAAGGGTGGAGATGATGCTGATTATGTACTTAAGCCTCCTCCTAAGCCGGTTTTGAAGTCCTCGGGCAGTAGGGGTAATGCCATTTTAGGCGTGAACTCGAGGAATAGTGAGGTGGGTGGTGATGCAGAAGAGAGGAATAAAGTGATTGAGTCGCTTGGTGATGTGTTGGAGAAGGCTGAAAAGCTGGGGAGTAATAATTCTAAGCTGGATGATAGTAAAAGGAATAACGGGCCGGTGAATAAACCGGTGGTATCTAATGTCAATGCTAATTCTAGAGTTGATAAAACTGTAAATTCAACAAAAAACCAGAAGGCTAAGACTGTGAAGAGTGTGTGGCGTAAAGGTGATACGGTTTCGACTGTCCAGAAGGTTGTGAAGGAAGTGCCTAAGCCTAGTAGTAACAAGAATGAAAGGGGGACTTCTCAAATTGGGGGAGGGCAGATCGCATCTCAATCTCGCGCTCCTCAGCTACCTCCAAAACCTCAACCGATGTTACAAACTAGACCTTCTATAGCTCCCCCAGACCCACCACCCGCGAAAAAGCCTGTTGTCTTGAAGGATACAGGGGCAGCTGACAAACCGGTTAAAGCTAAAGAAAGGAAAGGGCCCATCTTGATTGACAAATTTGCTTCCAAGAAACCAGTTGTTGATCCTGTAGTTGCTCAAGCTGTTCTTGCCCCTACAAAACCAGGGAAGGCCCCTCCACCAGGAAGGTTTAAAGACGATTACCGGAAGAGAGGTGCTCCGGCTGGGGGTGGAGCAAGAAGACGAAAACTTGACAATGCTATTCCTGATGATGACACATCCGAACTGAATGTCTCTATTCCTGGTGCTGCGAGAAAAGGAAGGAAATGGAGTAAAGCTAGTCGAAAAGCAGCAAGACTCCAGGCTGCCAGGGATGCAGCTCCTGTCAAAGCAGAAATTCTTGAGGTTAGTGATAAAGGTATGCTGGTGGAGGAGTTGGCGTATAACTTGGCGATCAGTGAAGGCGAAATCCTCGGTTCTCTTTACTCCAGGGGGATTAAACCAGATGGGGTACAAACTCTGGACAAAGATATGGTGAAGATGATTTGTAAAGAATATGATGTGGAAGTCATAGATGCTGACCCTGTCAAAGTTGAAGCATTGGCGAAGAAACGAGAAATCCTTGATGAAGGTGACCTTGACAAACTCAAAGATAGGCCTCCTGTCATCACTATCATGGGCCATGTAGATCACGGCAAAACAACTCTTTTGGATTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGTGCTTATAAAGTGCAAGTACCTTTCGATGGCAAACAGTTGCCATGTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGCGGAGCAAGAGTAACAGATATTGCTATCATTGTTGTGGCTGCTGATGATGGTATTCGTCCTCAAACAAATGAAGCAATAGCTCACGCCAAAGCAGCAGGGGTACCCATAATCATTGCTATAAACAAGATAGATAAAAATGGAGCAAATCCAGACCGAGTCATGCAAGAGCTTTCTTCAATTGGTCTAATGCCTGAAGACTGGGGTGGTGATGTTCCAATGGTCCAGGTAAGTGCTCTTAAAGGGGAGAATGTAGATGATCTCTTGGAAACTATTATGCTCGTTGCTGAGTTGCAAGAGCTGAAAGGTAATCCTGATAGAAGTGCAAAGGGTACGGTCATTGAAGCAGGTCTAGATAAATCAAAAGGACCACTTGCTACATTTATTGTGCAGAATGGCTCCCTTAAAAGGGGAGATATAGTGGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGTGTCGATTTAGCTACGCCCTCTACACCTGTACAGATTATTGGATTGAATAATGTCCCACATGCTGGTGATGAATTTGAGGTTGTTGAGTCCCTTGACGCTGCGCGTGAAAGGGCAGAGACCCGTGCCGAGTCATTGCGAAATGAACGTATTTCAGCAAAGGCAGGGGATGGCAAGGTCACCCTTTCTTCCTTAGCTTCTGCAGTTTCATCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTAAATATTATCTTGAAGGTTGATCTTCAGGGATCCATCGAAGCTGTCAGACAAGCGCTGGAGGTGTTACCACAAGATAATGTCACGTTGAAGTTTTTGTTAGAAGCAACAGGTGATGTGAATACAAGTGATGTTGACCTCGCAACCGCAAGCAAAGCTATTATTTTTGGATTTTATGTCAAAGCACCAGGCTCTGTGAAAAGCTATGCAGAGAATAAACTTGTTGAGATTAGATTATACAGAGTTATATATGAATTAATTGATGATGTGCGAAATGCAATGGAAGGGCTCTTGGATCTTGTTGAGGAACAAATAACAATTGGCTCAGCGGATGTACGGGCCACATTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGATTACAGATGGAAAGATAACAAAAGGCTGTGGTATTCGAGTCATTCGGAAGGGAAAAGTAATTCATGTTGGTCTTCTTGATTCTTTGAGACGAGTGAAGGAGATTGTTAAAGAGGTAAACATTGGTCTGGAGTGTGGAATTGGATTAGAAGATTACGATGATTGGGAAGAGGGTGATCGCATTGAAGCCTTTAACAAAGTTCAGAAGAAGCGGACGCTCGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAAGGAGTAGGAGCTTGA 3033 0.4441 MLILVGNVQGTMGSLASPVSLGNLMSVSSSRMSHSSVRRVSFSIGNCKGKKNWHCVSLSVCRYSVITTDFVADQGNSVSLDSNSSRESSSKGGDDADYVLKPPPKPVLKSSGSRGNAILGVNSRNSEVGGDAEERNKVIESLGDVLEKAEKLGSNNSKLDDSKRNNGPVNKPVVSNVNANSRVDKTVNSTKNQKAKTVKSVWRKGDTVSTVQKVVKEVPKPSSNKNERGTSQIGGGQIASQSRAPQLPPKPQPMLQTRPSIAPPDPPPAKKPVVLKDTGAADKPVKAKERKGPILIDKFASKKPVVDPVVAQAVLAPTKPGKAPPPGRFKDDYRKRGAPAGGGARRRKLDNAIPDDDTSELNVSIPGAARKGRKWSKASRKAARLQAARDAAPVKAEILEVSDKGMLVEELAYNLAISEGEILGSLYSRGIKPDGVQTLDKDMVKMICKEYDVEVIDADPVKVEALAKKREILDEGDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPFDGKQLPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKNGANPDRVMQELSSIGLMPEDWGGDVPMVQVSALKGENVDDLLETIMLVAELQELKGNPDRSAKGTVIEAGLDKSKGPLATFIVQNGSLKRGDIVVCGEAFGKVRALFDDGGKRVDLATPSTPVQIIGLNNVPHAGDEFEVVESLDAARERAETRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVRQALEVLPQDNVTLKFLLEATGDVNTSDVDLATASKAIIFGFYVKAPGSVKSYAENKLVEIRLYRVIYELIDDVRNAMEGLLDLVEEQITIGSADVRATFSSGSGRVAGCMITDGKITKGCGIRVIRKGKVIHVGLLDSLRRVKEIVKEVNIGLECGIGLEDYDDWEEGDRIEAFNKVQKKRTLEEASASMAAAVEGVGA* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0816 1010 MobiDBLite consensus disorder prediction 317 360 - -
Lan5g0816 1010 Gene3D Translation factors 659 775 - -
Lan5g0816 1010 CDD IF2_mtIF2_II 663 757 IPR044145 -
Lan5g0816 1010 TIGRFAM IF-2: translation initiation factor IF-2 404 994 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lan5g0816 1010 Pfam Elongation factor Tu GTP binding domain 488 648 IPR000795 GO:0003924|GO:0005525
Lan5g0816 1010 SUPERFAMILY Translation proteins 899 992 IPR009000 -
Lan5g0816 1010 TIGRFAM small_GTP: small GTP-binding protein domain 485 646 IPR005225 GO:0005525
Lan5g0816 1010 MobiDBLite consensus disorder prediction 216 245 - -
Lan5g0816 1010 Gene3D Translation factors 896 993 - -
Lan5g0816 1010 Coils Coil 742 769 - -
Lan5g0816 1010 MobiDBLite consensus disorder prediction 325 339 - -
Lan5g0816 1010 CDD IF2_eIF5B 486 652 - -
Lan5g0816 1010 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 483 656 IPR000795 GO:0003924|GO:0005525
Lan5g0816 1010 MobiDBLite consensus disorder prediction 76 134 - -
Lan5g0816 1010 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 790 902 IPR036925 -
Lan5g0816 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 478 656 IPR027417 -
Lan5g0816 1010 PRINTS GTP-binding elongation factor signature 487 500 IPR000795 GO:0003924|GO:0005525
Lan5g0816 1010 PRINTS GTP-binding elongation factor signature 539 549 IPR000795 GO:0003924|GO:0005525
Lan5g0816 1010 PRINTS GTP-binding elongation factor signature 555 566 IPR000795 GO:0003924|GO:0005525
Lan5g0816 1010 PRINTS GTP-binding elongation factor signature 591 600 IPR000795 GO:0003924|GO:0005525
Lan5g0816 1010 SUPERFAMILY Translation proteins 659 743 IPR009000 -
Lan5g0816 1010 CDD mtIF2_IVc 902 984 - -
Lan5g0816 1010 MobiDBLite consensus disorder prediction 246 271 - -
Lan5g0816 1010 ProSitePatterns Initiation factor 2 signature. 945 967 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lan5g0816 1010 Gene3D - 480 658 IPR027417 -
Lan5g0816 1010 MobiDBLite consensus disorder prediction 153 289 - -
Lan5g0816 1010 Pfam Translation-initiation factor 2 791 884 IPR023115 -
Lan5g0816 1010 Gene3D - 791 894 IPR036925 -
Lan5g0816 1010 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 44 1002 - -
Lan5g0816 1010 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 44 1002 IPR015760 -
Lan5g0816 1010 Hamap Translation initiation factor IF-2 [infB]. 7 992 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lan5g0816 1010 MobiDBLite consensus disorder prediction 159 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0816 Lan-Chr5 20799241 20806692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0816 484 698 Eukaryotic Initiation Factors Gene Family AT1G76810 34.981 1.19e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0816 K02519 - gmx:100778924 1471.06