Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0813 ATGTCCTGTTTTCCTTTCTTCAGCAAGGTTTCTTCTTCAGCAAGACAAGATCCCGACATTGATGAAGGCATTCAACATGTTAAACTCTATACCTACAATGAACTATCAAAAGCCACCAATGATTTTAGTCAGGCTAATAAAATTGGAGAGGGTGGTTTTGGTTCTGTCTATAAGGGACGGCTTAAAAATGGAAAATTTGCTGCTATAAAAGTTCTTTCAGCTGAATCAAGACAAGGGGAGAAGGAGTTCTTGACAGAGATCAATACCATTGCCGAAATACAGCACGAGAATTTGGTTAAGTTATACGGTTGTTGTGTGGAAAAAAATAACAGAATTTTAGTCTACAATTACCTTGAGAATAACAGCCTTGCTCAAACTCTTGTAGGTGGAGGTCACAGTAGTATCTACTTTGATTGGCAAACTCGATGTAGAATTTGCGTCGGTGTTGCACGAGGGCTTGCCTTTCTTCATGAAGAAGTAAGGCCTCTTATTGTTCACAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCCAAGATTTCAGATTTCGGTCTTGCAAAACTTATCCCTCCAAACATGACTCATGTCAGCACACGCGTAGCAGGAACATTGGGTTATTTGGCACCGGAGTATGCAATAGGAGGGAGGCTAACACGAAAAGCAGATATTTACAGTTTTGGTGTCCTCCTTCTGGAGATAGTCAGTGGAAGATGTAACACAAATTCGCAATTACCAATAGAAGAACAATTTCTTCTAGAAAGGGCATGGGATCTTTATGAGCGAAAAGAATTGGTAGGGCTAGTAGACACATCACTAAATGGAGAATTCGACGCCGAGCAGGCGTGTAAGTTTCTGAAGATTAGCCTTCTTTGCACTCAAGAATCTCCGAAGCTTCGGCCATCCATGTCATCTGTAGTGAAGATGCTCACTGGAAAAATGCATGTTGATGATAGTAAGATAACAAAACCAGCATTAATTTCTGACTTTATGGACCTTAAAGTTAGAAAGAATCAAGAAAGCAATATTGATACTACATATAATACATCATCTGCATCAGAAAACCAGGATAGTACCATGTCATCATCAGTTCCTTCAACTGCTAGGACTTCAACTTTCACTGCACACTATGATCAAAGTCTGTGA 1155 0.3974 MSCFPFFSKVSSSARQDPDIDEGIQHVKLYTYNELSKATNDFSQANKIGEGGFGSVYKGRLKNGKFAAIKVLSAESRQGEKEFLTEINTIAEIQHENLVKLYGCCVEKNNRILVYNYLENNSLAQTLVGGGHSSIYFDWQTRCRICVGVARGLAFLHEEVRPLIVHRDIKASNILLDKDLTPKISDFGLAKLIPPNMTHVSTRVAGTLGYLAPEYAIGGRLTRKADIYSFGVLLLEIVSGRCNTNSQLPIEEQFLLERAWDLYERKELVGLVDTSLNGEFDAEQACKFLKISLLCTQESPKLRPSMSSVVKMLTGKMHVDDSKITKPALISDFMDLKVRKNQESNIDTTYNTSSASENQDSTMSSSVPSTARTSTFTAHYDQSL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0813 384 Pfam Protein kinase domain 43 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0813 384 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0813 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lan5g0813 384 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Lan5g0813 384 SUPERFAMILY Protein kinase-like (PK-like) 21 314 IPR011009 -
Lan5g0813 384 CDD STKc_IRAK 48 315 - -
Lan5g0813 384 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 369 - -
Lan5g0813 384 Gene3D Phosphorylase Kinase; domain 1 12 117 - -
Lan5g0813 384 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Lan5g0813 384 PANTHER - 2 369 - -
Lan5g0813 384 MobiDBLite consensus disorder prediction 345 384 - -
Lan5g0813 384 ProSiteProfiles Protein kinase domain profile. 42 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0813 Lan-Chr5 20768133 20772534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0813 30 377 Receptor kinase-like Gene Family AT1G53440 50.287 1.41e-110 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan5g0813 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0813 - - gmx:100782320 629.017