Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0808 ATGAGCAACATAAGCATGGTAGAGGCTAACCTACCACCTGGGTTTAGGTTTCATCCTAAAGATGAAGAACTTGTGTGTGATTATTTGATGAAGAAGGTGATTCACAATGATTCCCCTCTCATGATTCATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAACAGCATGTGTAGGAGGGAAAGAGTGGTATTTCTACACACAAAGAGACCGCAAATATGCAACAGGGCTACGCACAAATCGTGCCACAGCCTCAGGTTATTGGAAAGCCACAGGAAAAGACAGAACAATCCACCTCAAAGGTACCCTTATTGGAATGAGAAAGACGTTGGTGTTCTATCATGGAAGGGCACCCAAAGGAAAAAAGACTGAATGGGTCATGCATGAATTTCGTATTGAAGGTCCTCATGGTCCTCCTAAATTTTCGTCCTCTAAGGAAGATTGGGTTTTGTGCAGGGTGTTCTATAAAAGCAGAGAAATTGCTACAAAACCAAGCATTGGAAGCTCCTATAATAACACAGGCTCTTCATCACTTCCTCAATTAGTGGACTCTTACATCACTTTCAATAACCAAGCCCAAACCCATGCATATGAATATGAGCAAGTGCCCTGCTTCTCCATTTTTTCCCAAAACCAAACCAACCCCATTAATTTCAACCACCACATAACCACTATGGACTCAAAAGTTTATGCCCACAATAATGCACCTACATATGGAGGAGCAAGCAATTTGGGTTCTTGTTTAGACACTTTTTCATGTGACAAGCAAGTGTTAACAGCTGTTTTGAGTCAGCTTACAAAGATGGAAAGAAACACATCTAACCAAATTGTAAAAGGGTCATCAAGTTTAGGAGAAGGGAGTTCAGGGAGTTACTTATCTGAAGTTGGTATGCCTCAGTTGTGGAACAATTATTGA 921 0.4115 MSNISMVEANLPPGFRFHPKDEELVCDYLMKKVIHNDSPLMIHVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRTIHLKGTLIGMRKTLVFYHGRAPKGKKTEWVMHEFRIEGPHGPPKFSSSKEDWVLCRVFYKSREIATKPSIGSSYNNTGSSSLPQLVDSYITFNNQAQTHAYEYEQVPCFSIFSQNQTNPINFNHHITTMDSKVYAHNNAPTYGGASNLGSCLDTFSCDKQVLTAVLSQLTKMERNTSNQIVKGSSSLGEGSSGSYLSEVGMPQLWNNY* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0808 306 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Lan5g0808 306 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN 3 302 - -
Lan5g0808 306 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Lan5g0808 306 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 302 - -
Lan5g0808 306 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Lan5g0808 306 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0808 Lan-Chr5 20716046 20722096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0808 2 304 NAC Transcription Factor Family AT1G56010 57.994 2.17e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan5g0808 NAM 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0808 - - gmx:100301890 496.123