Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0807 ATGGCCATCGTCATCACCGCCGACACGGTTCAACGCGCCGTCGACTCTCTCCTCAAATGGCGCACTTCCCAATCCCAAACCCAAACCCCAAAACTCTTCGACCAAGACGATGAATTTGTCTACCTCATCCTCACTCTCAAGAAGGTTCCACCAAAGGGGCGCGTGAACCCACACAAGGTTCCACTTCCTCATTCTCTAACGTCTGAATTCTCTGAACGCTGCTTAATCATTGATGATAGACCCAAATCTAATCTCACGAAAGCAGATTCTCAGAAGAAGATCAAATCTGAGAATATTCCGATTTCGAAGGTTTTGAAGCTCTCCAAGTTGGCTTCTGATTACCGTGCTTTTGAGGCGAAGCGTAAGTTGTGTAATTCTTATGATATGTTTTTTGCTGATAAGAGGATTGTGCCATTGCTGCCTAGGTTGTTAGGGAAGCAGTTTTTTAAGAAGAAGAAGGTTCCAGTGCCGTTGGATTTGAAGAAGAATAATTGGAAGGAGCAGGTTGAGAAGGCGTTGTCTTCGGGTTTGTTGACGCTTAGGACTGGGACTTGTAGTGTTGTTAGGGTTGCGAAGCTGAGTATGGAGAGGGATGAGATTGTGGAGAATGTGATTGCGGCAATTGGTGGGGTTGTTGAGATTATTCCGAAGAAATGGGGGAATGTGAGGTCTTTTCATGTTAAGTTGTTGGAGTCGCTCGCGCTTCCGGTTTATCAGGCTGTTCCGGATATCAAGTTGAGGATTGATGGAAGTAAGGCTGAGGAGGAGGAAGCTGAGTTGAAGAAGAAGGAGGAGAGCGAGAAGGAGGAGGAGAGTGAGGGTGGAGAGGTTAGTGATCGGAAAGCGGGGAAGAAGAAGGGGAGGATTCATCAAGTTAGGTATATGGATGATGATAAAGTTGATGAGGATGCTGTTGAAGATAAGTCGGGTGGTTTGGATGGTAATAAGGATGCTGTTGATTCCGACATTGATGAAAAGGGTAGTGCGGAATTGGTGAGTAAGAAGAGAAAGAAAGGCGTGAAAGTTGGTAATGGAGCTGTAAGTGAGTTGAGCAGTGTCAAGAAGCTGAAGAAATCTGCCAAGGAAAGCAGCAAACAGAAGAAGAAAGAAGTGAAGGAGAACTCGGCCAAGCAAAGTAAAACCGAGGATGAAGAGTCTGCTGGCAAGAAGAAGAAGAAGGCGATCAAGCAAAATAAAAGTGAGGATGAAGAGTCGGCTGACAAGAAAAAGAAGGTGATCAAGCAAAATGAAACTGTGGAGGAAGAGTCTGCTGGCAAGAAGAAGAAGGTGATCAAGCAAAATAAAAGTGAGGATGAAGAGTCTGCTGGCAAGAAGAGGAAGGTGATCAAGCAAAATAAAAGTGAAGATGAAGAGTCTGCTGGCAAGAAGAAGAAGGTGATCAAGCAAAGTAAAAGTGAGGATGACGTGTCCGGCAAGAAGAAGAAGGTAATCAAGCAAACTAAAAGTGAGGATGACGCTTCTGGCAAGAAGAAGAACAAGGGAGTGGATGGCAAAGCTAAGGTTAAGAGAGGTAAGAAGTCTGCATAG 1548 0.4503 MAIVITADTVQRAVDSLLKWRTSQSQTQTPKLFDQDDEFVYLILTLKKVPPKGRVNPHKVPLPHSLTSEFSERCLIIDDRPKSNLTKADSQKKIKSENIPISKVLKLSKLASDYRAFEAKRKLCNSYDMFFADKRIVPLLPRLLGKQFFKKKKVPVPLDLKKNNWKEQVEKALSSGLLTLRTGTCSVVRVAKLSMERDEIVENVIAAIGGVVEIIPKKWGNVRSFHVKLLESLALPVYQAVPDIKLRIDGSKAEEEEAELKKKEESEKEEESEGGEVSDRKAGKKKGRIHQVRYMDDDKVDEDAVEDKSGGLDGNKDAVDSDIDEKGSAELVSKKRKKGVKVGNGAVSELSSVKKLKKSAKESSKQKKKEVKENSAKQSKTEDEESAGKKKKKAIKQNKSEDEESADKKKKVIKQNETVEEESAGKKKKVIKQNKSEDEESAGKKRKVIKQNKSEDEESAGKKKKVIKQSKSEDDVSGKKKKVIKQTKSEDDASGKKKNKGVDGKAKVKRGKKSA* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0807 515 MobiDBLite consensus disorder prediction 257 337 - -
Lan5g0807 515 Coils Coil 248 273 - -
Lan5g0807 515 MobiDBLite consensus disorder prediction 354 501 - -
Lan5g0807 515 Coils Coil 353 373 - -
Lan5g0807 515 Gene3D - 83 175 IPR016095 -
Lan5g0807 515 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1-LIKE 5 242 - -
Lan5g0807 515 SUPERFAMILY Ribosomal protein L1 32 238 IPR023674 -
Lan5g0807 515 MobiDBLite consensus disorder prediction 257 515 - -
Lan5g0807 515 CDD Ribosomal_L1 10 237 IPR028364 -
Lan5g0807 515 Pfam Ribosomal protein L1p/L10e family 29 232 IPR028364 -
Lan5g0807 515 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0807 Lan-Chr5 20670576 20672495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0807 126 228 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 30.097 2.12e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0807 K14775 - gmx:100815650 407.142