Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0785 ATGCCTTCTAAGTCCAAACCAGGATGGCTTCTCCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTCAGACCTGATGTAAAGAGAGGCAATTTTACAATAGAAGAAGAGCAATCCATAATAAAGCTACATAACGACTTTGGAAACAAGTGGTCAAAGATTGCATCATGTTTACCTGGTAGGACAGACAATGAGATCAAGAATGTTTGGAACACTCACTTAAAGAAAAGATTAATTGTCAAAAGTTCAGAATCTAGTGCAGATGAATCCAAGATGGAATCATCAATAACTTCCTCATCTTCATCTGAATCATTTTCCACTAATGAGGAACCAAATCTAGCTAAGACAATTCCTAATAGTGAATTAAATGAGCAAGCATTCCAAGTTACAATGAATGAGAAAATTGAACATGATTCAGAAAAACATGTTTCCAATGAAGTCATTAGCATCATTGAGGACCCAAAAGATTCATCAACTTATTCATTCTCTTTTGTTGAGTCAAATATCCTTAACTCAAACCATATCGTTCCCTTCACACAAGAACAACAATTGTGTTCTCCATTAACCTATCTAGGACCTTATAATATTGACAATAATAATATTAATAATACATTACAAGAGGTTGATAAACCAAACAATTTGATTGAAATACCATGGGATTCAGATGAAGATTTTTGGAAGTTGATAGATAACTTTGAATCATTGCAATCAAGTGAAGTCCAATTAGAAGGGGACCCATCTAACCAAACACCAAATCATGTACAAGAGAGTGTTCAAGATGGTGAAAACATGAAGTGGACCCATGAGTTTGATAATGAGTTTGGTGAAAGAAACGAGTCTAATAAGGACCAGTTTCTACCAAAGAATTATGCAGCTGAGCTAGGAGTGGACCCTCATACATTTGATTTTGATGTTATGGAAAAGCCAGAATCTGAACTAGACTTGAGAAATATTCAATTATGGCTCATGGCATGA 981 0.3507 MPSKSKPGWLLRCGKSCRLRWINYLRPDVKRGNFTIEEEQSIIKLHNDFGNKWSKIASCLPGRTDNEIKNVWNTHLKKRLIVKSSESSADESKMESSITSSSSSESFSTNEEPNLAKTIPNSELNEQAFQVTMNEKIEHDSEKHVSNEVISIIEDPKDSSTYSFSFVESNILNSNHIVPFTQEQQLCSPLTYLGPYNIDNNNINNTLQEVDKPNNLIEIPWDSDEDFWKLIDNFESLQSSEVQLEGDPSNQTPNHVQESVQDGENMKWTHEFDNEFGERNESNKDQFLPKNYAAELGVDPHTFDFDVMEKPESELDLRNIQLWLMA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0785 326 MobiDBLite consensus disorder prediction 83 123 - -
Lan5g0785 326 CDD SANT 33 76 IPR001005 -
Lan5g0785 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 298 - -
Lan5g0785 326 SMART sant 30 78 IPR001005 -
Lan5g0785 326 PANTHER - 9 298 - -
Lan5g0785 326 Gene3D - 3 30 - -
Lan5g0785 326 SUPERFAMILY Homeodomain-like 12 83 IPR009057 -
Lan5g0785 326 ProSiteProfiles Myb-like domain profile. 26 76 IPR001005 -
Lan5g0785 326 MobiDBLite consensus disorder prediction 243 262 - -
Lan5g0785 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 80 IPR017930 -
Lan5g0785 326 Pfam Myb-like DNA-binding domain 31 76 IPR001005 -
Lan5g0785 326 Gene3D - 32 106 - -
Lan5g0785 326 MobiDBLite consensus disorder prediction 91 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0785 Lan-Chr5 20141334 20142905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0785 10 287 MYB Transcription Factor Family AT1G79180 39.286 4.50e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan5g0785 Myb_DNA-binding 3.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0785 K09422 - gmx:100805511 334.724