Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan5g0777 | ATGGCATCAACTATTTTCTCAAAGACTCTATTGGGCCATCGTTTCATTCACTCTTTCTCATCTCTCACTTCCACGTCACAATTTTTCTCATCTTTCTTCACTAAGCGGCCGTTTTCTATACGAGCCATCCCATCTTATACAGCTCAAAACATCAAAACGACCCGTTGGACAACTCGTATGGCTTCTTTCGTAGTTGGTAGAAGAGCTACATATTCAACAAAATCTGCATCAACGAATGAGCCAGTTGTTTCTGTGGATTGGCTTTATGATAACCTGAAGGATCCTGATATGAAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAATCCAATACAAGAATATCAGGTTGCACACATTCCTGGGGCCCTTTTCTTTGATGTAGATGGAATATCCGATCAAACTACAAAGTTGCCACACATGTTGCCATCAGGGGAAGCTTTTGCTGCTGCTGTTTCTGCTCTTGGCATACAGAATAAAGATGATTTGGTTGTTTACGATGGCAAAGGAATATTTAGTGCCGCTCGTGTTTGGTGGATGTTCCGAGTGTTCGGTCATGACAGAGTTTGGGTATTAGATGGCGGCCTTCCAAGATGGCGTGCATCAGGATATGATGTTGAATCTAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCAACTGAGGCAATAGAGAAAACATATCAGGGACTATCGGTTGGCCCAATCACATTTCAGACTAAATTTCAGCCACACCTTGTTTGGAACCTTGATCAGGTGAAGAGAAACATTGAGGAAAAAAGTCACCAACATATAGATGCTCGGTCAAAGCCCAGGTTTGATGGAGCTGCACCAGAGCCTCGAAAGGGAATAAGAAGTGGTCATGTACCTGGCAGCAAATGCATTCCTTTTGGTCAGTTGTTAGATAATGGTTCACATACACTATTACCAGAAGATGAGCTTAAGAAGCGATTTGATCAAGAAGGCATCTCTTCGGAAAGCCCTGTTGTGACTTCTTGTGGGACTGGAGTAACTGCTTGCGTTCTTGCTTTGGGTCTTCATCGACTCGGAAAGTCTGATGTTGCAGTTTATGATGGTTCTTGGACTGAATGGGGAGCACAATCTGATACAGAAGTGGAAACTTCAGAACCTTGA | 1143 | 0.4357 | MASTIFSKTLLGHRFIHSFSSLTSTSQFFSSFFTKRPFSIRAIPSYTAQNIKTTRWTTRMASFVVGRRATYSTKSASTNEPVVSVDWLYDNLKDPDMKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGISDQTTKLPHMLPSGEAFAAAVSALGIQNKDDLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIEKTYQGLSVGPITFQTKFQPHLVWNLDQVKRNIEEKSHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFGQLLDNGSHTLLPEDELKKRFDQEGISSESPVVTSCGTGVTACVLALGLHRLGKSDVAVYDGSWTEWGAQSDTEVETSEP* | 381 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan5g0777 | 380 | ProSitePatterns | Rhodanese signature 1. | 117 | 128 | IPR001307 | GO:0004792 | |
| Lan5g0777 | 380 | SMART | rhod_4 | 83 | 207 | IPR001763 | - | |
| Lan5g0777 | 380 | SMART | rhod_4 | 251 | 373 | IPR001763 | - | |
| Lan5g0777 | 380 | ProSitePatterns | Rhodanese C-terminal signature. | 357 | 367 | IPR001307 | GO:0004792 | |
| Lan5g0777 | 380 | CDD | TST_Repeat_1 | 82 | 205 | - | - | |
| Lan5g0777 | 380 | ProSiteProfiles | Rhodanese domain profile. | 261 | 376 | IPR001763 | - | |
| Lan5g0777 | 380 | PANTHER | THIOSULFATE SULFERTANSFERASE | 63 | 378 | IPR045078 | GO:0016783 | |
| Lan5g0777 | 380 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 80 | 212 | IPR036873 | - | |
| Lan5g0777 | 380 | PANTHER | THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE | 63 | 378 | - | - | |
| Lan5g0777 | 380 | CDD | TST_Repeat_2 | 252 | 369 | - | - | |
| Lan5g0777 | 380 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 254 | 379 | IPR036873 | - | |
| Lan5g0777 | 380 | MobiDBLite | consensus disorder prediction | 263 | 284 | - | - | |
| Lan5g0777 | 380 | MobiDBLite | consensus disorder prediction | 263 | 291 | - | - | |
| Lan5g0777 | 380 | Coils | Coil | 253 | 273 | - | - | |
| Lan5g0777 | 380 | Gene3D | - | 247 | 379 | IPR036873 | - | |
| Lan5g0777 | 380 | ProSiteProfiles | Rhodanese domain profile. | 93 | 210 | IPR001763 | - | |
| Lan5g0777 | 380 | Gene3D | - | 74 | 217 | IPR036873 | - | |
| Lan5g0777 | 380 | Pfam | Rhodanese-like domain | 84 | 203 | IPR001763 | - | |
| Lan5g0777 | 380 | Pfam | Rhodanese-like domain | 254 | 369 | IPR001763 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan5g0777 | Lan-Chr5 | 20051119 | 20063034 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan5g0777 | 60 | 379 | Sulfurtransferasese or Rhodanese | AT1G79230 | 76.875 | 0.0 | 527 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan5g0777 | K01011 | - | gmx:100798053 | 646.736 |