Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0771 ATGGAAGTATCAAGATCCCAAAGAACACTCCCATTGAACAACATGGAATCTGGAAATAAAGAATTCCAGCCTGGACCACAGTCAGTAATGCAAGACCATCTGGATGTCATGCATGCTAGTAGAAGACCACCTGACTTCAGTACATCAGACGTTAAACCTGTACTTAATTACTCCATGAACACAGGTGAGGAATTTGCACTCGAATTTTTGAGAGATAGGGTCAATCTCAGGAATCCCGTATTTTCAAATGCCAGTGATTCCAATTATACAATGGGTTATATGGATCTGAAAGGTATTTTAGGCATTAGTCATCCAGGGTCTGAAAGTGGATCGGACATTTCTATGCTCTCAATGGTCGATAAATATCCAAAAGAGTATGATAGAATGAACACATCATTGCATGGAGACACAAGCAATTATGGGTCAATTCGACCAATACCAAAATCTTCATTGAATCTGGACAATAGACAATATGTGCATGGGTATGGCTCTTCGCGAGGTTATGATAGCTTGTCAACAATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGGCCCTGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGTATTCTTCGTATAAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTGTTGATCTATAATCAGACTCATGTAGTCAAGTATCAGCTTCCTGGAGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGCAATCATCTAGAAGATAGAGAAGGATCGCAAAAGCTTCGAATGTTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAGTTTGGTCTTGGTAGCATGGGTGATGATTCTGAAATACAGTATTTTGTTGCTGTTAATGGCATGGACTTGGGGTCAAGGAAAAACTCAACCATGTTCGGCGTTGGTTTTTCAGAAAATGATATACATGAGTTAGACGGGCAAAATATTGAGAGAGAGACTAGTAGAGTTGCTCTGGAATCTATAGGTGTTGGCAATGCTCCCTTGACTAGCAAATTTGACTCATTAATGAATACCCAGTCTGCAGAACCGGTGCTACCATCTTCTTCAAATTCTTATGAAACCTATCCACTATTTTATGGTGACCAAATGATGCGCCATGAGGAACCTAGTGGTCAATATCTTACGAATCATGGCCTTAACCCTTCTCATGGACCTGTTTTAGGAGAGATTCCTTATACAACGGCTCCTCATATACTAATTAATCAACAAGGGATTTTAAATGAGGGCCATCCAGGTGGTGGTTTAGAAATACAAAATTCAGAAATACCAGCAATGCTGGCTAAAAAGATGGGAGATAGTTCAATTCAACAAGGTGACCCTGGGAAAGCGGTATCCTCGGAAACTCCTGTGCAACTGTTTGATGGTTACTATAAAAATATTTTTCCTGAAGCATCAGCTGTAGTTACTGTGCCAGAGGGGCATTCAATACCTCCAACTAAAAATGACCGGCTTCAGGATTACGAAGAGGTTTTTTCCACATCTAGCAGTGCATTTAGTCCTTCTTATGTTGATTCCCAATCTAATGCCGTTGACTTGAGTTCTCTTCACCCTCCTCCTCTTCCTAAAAGAGTTTACTATTCAGAAAGAATTCCCAGGGAGCAAGTAGAGTTTCTGAATCGATCCTCTAAGTCAGATGATGCAAACCGTTCACAGATTCATGTTTCAGATTTACTTTCTGATGTCAACCTGCCGGATTCAGTCAGAGAATCTGGTGGCAACTTGCAAGATAGAAATATGTCTAATCTAGCCGAGGAATCAAGCATCACAGCCAAGCCCTTGCATGCAGATGGCTATGCCATTGACAATGGAAGGAGTAAAGATGTCATAAATAAGGATAATGTTGTTAGTCTGGAAACTGAATTTTATAGTAAAGATAATCATTACAAACCCCTGCTTGATGAGTCGAAAGATGGCAAATCAGAGTATCCTGCTTTGCACCAAGTTCCCTCTGTTAAGCACCATGATGATCCAGCATCCAATCTTCCAGAGATTGATTGGGGTGATGCCGCTGTGATGGAATCTAATGATGATTATAGGGTGCAAGCGCTACCTGTTACTTTAAATGGAAACACAACTATGAAAGATGAATCTCAAGATTTTCCTTCAAATGTTGTTTCCAAACAAGCACAAGGTGACATTCTTATTGATATTAATGATCGGTTTCCGCGTCAATTGCTTAGTGATATATTCTCTAAAGCAATACTTGAAGAAGATCCCTCTAGTCTGCATCCATTAACCTCGGATGGAGTAGGCCTAAGTGTAAACATGGAAAATCATGAACCTAAACGATGGTCGTATTTTCAAAAATTGGCACAAGGGCTCGATAATGTGTCTCTTATTGACCAGGATCATCCTGGTTTATCACCTGCACTAAGAGAATTAGGAGATAATAGAACTCAACATGTCACACCTCTAACAACTGATGAAGAAAATCAGAAAGACTTACATGGAAGGAATGGGACTGAATCCAATGCTCTGAAGTCAAATTATGATCATTCGGAAGTGAAGGACACTGAAAGTATGCAGTTTGGTGCTATGATAGAAAACCTAAGAGCGCATGAGTCAGAATATGAGGATGGAAATTTTGAATCAAGAAACATTGGTCTACCTCCAGTTGATCCTTCTTTAGGAGAATTTGATATGAGTACCTTGCAGGTCATTATGAACGAAGATCTTGAAGAGCTGAGGGAACTTGGTTCTGGCACCTTTGGGACTGTGTATCATGGAAAATGGCGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTCTAGAATTCTGGCGGGAAGCAGACATTCTGTCCAAGCTTCACCATCCAAACGTGGTGGCATTTTATGGTGTGGTGCAGAATGGACCAGGAGGAACAATGGCCACTGTTACAGAATTCATGGTCGATGGTTCTCTTAGGCACGTTTTACTTCGCAAGGATAGGTATCTAGATCGTCGCAAGAGATTGATAATTGCAATGGACGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGATTTAAAATGTGACAATTTGCTCGTGAACTTAAAAGATCCTTTACGGCCAATATGCAAGGTAGGTGATTTTGGCTTGTCGAAAATTAAACGAAATACCTTGGTTTCTGGTGGTGTGCGGGGGACTTTGCCTTGGATGGCACCGGAGCTGCTAAATGGTAGCAGCAACAAGGTCTCAGAGAAGGTTGATGTGTTCTCTTTTGGCATTGTATTGTGGGAGATTCTCACTGATGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGCATTGTCAATAACACACTAAGGCCAACAATCCCAAGTTATTGTGATCAGGAATGGAGAACACTAATGGAGGAATGTTGGGCACCCAATCCTTCAGCTAGACCTTCCTTTACCGAGATCGCCAGTCGATTGCGTGTAATGTCCGCGGCAGCTCTACCAACCAAAACACAGGGCCACAAGGCATCTAAATGA 3594 0.4115 MEVSRSQRTLPLNNMESGNKEFQPGPQSVMQDHLDVMHASRRPPDFSTSDVKPVLNYSMNTGEEFALEFLRDRVNLRNPVFSNASDSNYTMGYMDLKGILGISHPGSESGSDISMLSMVDKYPKEYDRMNTSLHGDTSNYGSIRPIPKSSLNLDNRQYVHGYGSSRGYDSLSTMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELMQKALLIYNQTHVVKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRMFLFSMSDLEDAQFGLGSMGDDSEIQYFVAVNGMDLGSRKNSTMFGVGFSENDIHELDGQNIERETSRVALESIGVGNAPLTSKFDSLMNTQSAEPVLPSSSNSYETYPLFYGDQMMRHEEPSGQYLTNHGLNPSHGPVLGEIPYTTAPHILINQQGILNEGHPGGGLEIQNSEIPAMLAKKMGDSSIQQGDPGKAVSSETPVQLFDGYYKNIFPEASAVVTVPEGHSIPPTKNDRLQDYEEVFSTSSSAFSPSYVDSQSNAVDLSSLHPPPLPKRVYYSERIPREQVEFLNRSSKSDDANRSQIHVSDLLSDVNLPDSVRESGGNLQDRNMSNLAEESSITAKPLHADGYAIDNGRSKDVINKDNVVSLETEFYSKDNHYKPLLDESKDGKSEYPALHQVPSVKHHDDPASNLPEIDWGDAAVMESNDDYRVQALPVTLNGNTTMKDESQDFPSNVVSKQAQGDILIDINDRFPRQLLSDIFSKAILEEDPSSLHPLTSDGVGLSVNMENHEPKRWSYFQKLAQGLDNVSLIDQDHPGLSPALRELGDNRTQHVTPLTTDEENQKDLHGRNGTESNALKSNYDHSEVKDTESMQFGAMIENLRAHESEYEDGNFESRNIGLPPVDPSLGEFDMSTLQVIMNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQNGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTDEEPYANMHYGAIIGGIVNNTLRPTIPSYCDQEWRTLMEECWAPNPSARPSFTEIASRLRVMSAAALPTKTQGHKASK* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0771 1197 MobiDBLite consensus disorder prediction 826 853 - -
Lan5g0771 1197 PRINTS Tyrosine kinase catalytic domain signature 997 1010 IPR001245 GO:0004672|GO:0006468
Lan5g0771 1197 PRINTS Tyrosine kinase catalytic domain signature 1034 1052 IPR001245 GO:0004672|GO:0006468
Lan5g0771 1197 PRINTS Tyrosine kinase catalytic domain signature 1105 1127 IPR001245 GO:0004672|GO:0006468
Lan5g0771 1197 PRINTS Tyrosine kinase catalytic domain signature 1149 1171 IPR001245 GO:0004672|GO:0006468
Lan5g0771 1197 Gene3D Transferase(Phosphotransferase) domain 1 1003 1197 - -
Lan5g0771 1197 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 88 1197 - -
Lan5g0771 1197 MobiDBLite consensus disorder prediction 1 27 - -
Lan5g0771 1197 Gene3D Phosphorylase Kinase; domain 1 908 1002 - -
Lan5g0771 1197 SMART serkin_6 915 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0771 1197 Pfam PB1 domain 191 274 IPR000270 GO:0005515
Lan5g0771 1197 SUPERFAMILY Protein kinase-like (PK-like) 905 1177 IPR011009 -
Lan5g0771 1197 Gene3D - 193 276 - -
Lan5g0771 1197 SMART PB1_new 189 276 IPR000270 GO:0005515
Lan5g0771 1197 ProSiteProfiles Protein kinase domain profile. 915 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0771 1197 ProSitePatterns Protein kinases ATP-binding region signature. 921 946 IPR017441 GO:0005524
Lan5g0771 1197 MobiDBLite consensus disorder prediction 1 26 - -
Lan5g0771 1197 PANTHER SERINE-THREONINE PROTEIN KINASE 88 1197 - -
Lan5g0771 1197 CDD STKc_MAP3K-like 921 1178 - -
Lan5g0771 1197 CDD PB1_UP2 178 274 - -
Lan5g0771 1197 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1040 1052 IPR008271 GO:0004672|GO:0006468
Lan5g0771 1197 Pfam Protein tyrosine and serine/threonine kinase 916 1178 IPR001245 GO:0004672|GO:0006468
Lan5g0771 1197 SUPERFAMILY CAD & PB1 domains 191 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0771 Lan-Chr5 19597495 19608363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0771 26 1197 MAP Kinase Kinase Kinase AT1G16270 47.854 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lan5g0771 PK_Tyr_Ser-Thr 3.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0771 - - gmx:100799639 1818.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0074 19 568294 574941 Lan5g0771 5 19597495 19608363 LSH
Lan5g0771 5 19597495 19608363 Lan9g0198 9 2384827 2393598 LSH