Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0753 ATGGCGTTATCATCAGTAGCATCGAACCCTCATATGAGACTGCTCTCTTCAAAGTTTCTCTCTCGTTCTTCCCATCTACTCTCTATTCACTTGCAGAGGCAGCATTCAACTCCTATTCTCACTCGAAAGATAAGCATGGATGCTCGGAGTGTCGCTTCTCAGCTTAATAGTTCTGGCCTTTTGAGGACACAGGGCCTTATCGGTGGGAAATGGAGCGATGCTTATGATGGGAAAACCATAAAGGTTTACAATCCAGCAACGGGTGAATCCATAGCAGATGTTGCATACATGGGTGCAAGAGAGACGAATGATGCAATTGCTTCAGCCTATGATGCGTTTAAATCATGGAGCAAAATCACTGCTGCTGAGAGGAGCAAATATCTGAGGAAATGGTGTGATTTGCTAATGGCAAATAAAGAAGAGATTGCACAACTTATGACCTTGGAGCAAGGGAAGCCTCTTAAAGAGTCTTTGGGTGAGGTAAGCTATGGGGCTGGCTTTATTGAGTTTGCAGCTGAGGAGGCAAAACGTATATATGGTGATATAATTCCGTCACCTCTATCTGACCGGAGGCTATTTGTTTTAAAGCAGCCTATAGGAGTTGTAGGTGCAATCACACCATGGAACTTTCCCCTGGCTATGATTACCCGAAAGGTTGGTCCAGCTCTTGCATGTGGCTGTACAGTGGTCATAAAGCCCTCTGAACTTACGCCTCTCACTGCTTTAGCTGCTGCAGAACTCTCTATTCAAGCTGGAATACCTGCGGGTGTTGTGAATGTGGTTATGGGAAATGCTCCTGAAATTGGAGACGCTTTAGTTGAAAGTCCACAGGTACGCAAGATCACATTCACGGGCTCAACAGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCGAAGACAGTAAAAAAAGTATCCCTGGAACTTGGTGGCAATGCACCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTAAAAGGAACTATTGCAGCAAAGTTCCGTAACAGTGGACAAACATGTGTTTGTGCTAATAGAATTCTCGTGCAAGAAGGTATATATGACAAATTTGCGGAGGCTTTGGTTGATGCTGTCCAGAAGATGAAAGTTGGGAATGGTTTTGGTGAAGGTGTCGTTCAGGGCCCTCTGATCAATGACGCTGCTGTGGAAAAGGTGGAGAACTTACTTAATGATGCTACATCGAAGGGGGCTAAAATAATTTTGGGGGGCAAAAGACATAGTCTTGGATTAACCTTTTATGAACCAACAGTTGTCAGTGATGTCAGTAATGAGATGGGCATAGCAAGAGAGGAAGTATTTGGTCCCATTGCGCCCCTTTTGAGGTTCAAATCTGAAGAGGATGCTATCAATATCGCTAACGACACTAATGCAGGTCTGGGTTCGTACGTATTTACCAACAGTATCCAACGATCATGGCGTGTTGTTGAGGCTCTTGAATATGGACTTGTGGGTGTCAATGAAGGAGTAATTTCAACTGAGGTGGCTCCATTTGGCGGTTTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGAATGGATGATTATTTGGAGATCAAATATGTGTGCATGGGAAACATTAACAAATTATGA 1617 0.4403 MALSSVASNPHMRLLSSKFLSRSSHLLSIHLQRQHSTPILTRKISMDARSVASQLNSSGLLRTQGLIGGKWSDAYDGKTIKVYNPATGESIADVAYMGARETNDAIASAYDAFKSWSKITAAERSKYLRKWCDLLMANKEEIAQLMTLEQGKPLKESLGEVSYGAGFIEFAAEEAKRIYGDIIPSPLSDRRLFVLKQPIGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPEIGDALVESPQVRKITFTGSTAVGKKLMAGSAKTVKKVSLELGGNAPCIVFDDADLDVAVKGTIAAKFRNSGQTCVCANRILVQEGIYDKFAEALVDAVQKMKVGNGFGEGVVQGPLINDAAVEKVENLLNDATSKGAKIILGGKRHSLGLTFYEPTVVSDVSNEMGIAREEVFGPIAPLLRFKSEEDAINIANDTNAGLGSYVFTNSIQRSWRVVEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDDYLEIKYVCMGNINKL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0753 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 524 IPR016162 GO:0016491
Lan5g0753 538 Pfam Aldehyde dehydrogenase family 73 530 IPR015590 GO:0016491
Lan5g0753 538 CDD ALDH_F5_SSADH_GabD 82 532 - -
Lan5g0753 538 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 534 - -
Lan5g0753 538 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 534 - -
Lan5g0753 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Lan5g0753 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
Lan5g0753 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Lan5g0753 538 SUPERFAMILY ALDH-like 59 535 IPR016161 GO:0016491
Lan5g0753 538 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 82 528 IPR010102 GO:0009013|GO:0009450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0753 Lan-Chr5 19290488 19302881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0753 18 537 Aldehyde Dehydrogenase Gene Family AT1G79440 76.923 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0753 K17761 - gmx:100808318 880.552