Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0751 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAAATATGAACTCTCATGACAGACCCATGTGTGTTCAAGGGGACTCGGGTCTTGTCCTTACCACTGACCCAAAACCTCGCCTTCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAACTTGGAGGGCCAGATAAGGCAACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTAAAGAGCCACCTCCAGAAATTTAGGCTTGGGAAGCAGCCCCACAAGGATTTCAATGATCACTCGATTAAGGATGCTTCAGCTTTAGAACTGCAAAGAAATACTGCCTCCTCTTCAGCCATGATCGGCCGCAACATGAATGAGATGCAAATTGAGGTGCAGAGAAGACTGCATGAACAACTTGAGGTTCAAAAGCACCTTCAGCTAAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGTCATCTTCAATAAATATGAAGTCTATGGTTCCTCATCAAAGCATCCTTGACATGGGAGTCATGAAAGAATTTGGCTCCCCTATTAATTTCTCTTCTTTCCAAGATCTTGATATATTTGGAGGTGACCAAATTGATCTTCAGCCAAACATGGAGAAGCCACCCCTTGAAGGGTTTATGCCAATGAATGAAGACTTGTGCCTTGGGAAAAAGAGGCCAAACCCTTATACTGGGAGTGGAAAGAGCCCTTTGATTTGGAGTGATGATCTAAGGCTTCAAGATTTGGGTACACCCTCATCATGCCTTGGCCCTCAAGATGACCCTTTCAAAGGTGACCAGATTCAACTTGCACCATCATCAATGGATAGAGGCACTGAGATTGATCCAATGTCAGAAATGTATGACACAAAAACCTCACACCATGGGGATGAGAAGAAATTTGATGCATCTTTGAAGCTTGAAAGGCCATCACCAAGAAGGACACCTATTCAAGTAGAAAGGATGAGTCCTATGATCAGCACTGGTTCAATGGCACAAGGTAGAAGCTCACCATTTGGGTGA 1077 0.442 MERMFPPKKPSNMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMSSSINMKSMVPHQSILDMGVMKEFGSPINFSSFQDLDIFGGDQIDLQPNMEKPPLEGFMPMNEDLCLGKKRPNPYTGSGKSPLIWSDDLRLQDLGTPSSCLGPQDDPFKGDQIQLAPSSMDRGTEIDPMSEMYDTKTSHHGDEKKFDASLKLERPSPRRTPIQVERMSPMISTGSMAQGRSSPFG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0751 358 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Lan5g0751 358 Gene3D - 34 92 - -
Lan5g0751 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 309 IPR044848 GO:0003700
Lan5g0751 358 MobiDBLite consensus disorder prediction 273 358 - -
Lan5g0751 358 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Lan5g0751 358 MobiDBLite consensus disorder prediction 339 358 - -
Lan5g0751 358 MobiDBLite consensus disorder prediction 300 333 - -
Lan5g0751 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 309 - -
Lan5g0751 358 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Lan5g0751 358 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Lan5g0751 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0751 Lan-Chr5 19225590 19228034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0751 4 358 G2-like Transcription Factor Family AT1G79430 56.915 9.13e-125 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan5g0751 Myb_DNA-binding 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0751 - - ccaj:109805894 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0104 19 922749 927739 Lan5g0751 5 19225590 19228034 LSH